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SyntaxWarning: invalid escape sequence '\d' return [atoi(c) for c in re.split("(\d+)", text)]
#1326
opened Jul 4, 2024 by
sheikki
1 task done
Build system should use available deps instead of externals when they are available
#1325
opened Jul 3, 2024 by
bzizou
'Failed to limit memory to' error on Mac M3 Max, while SPAdes runs normally via a virtual Linux machine on the same computer.
io
Input / output (e.g. due to disk storage) errors
#1324
opened Jul 2, 2024 by
mkazanov
1 task done
No error code metaspades just terminate after 13 hours of running kmer counting
outdated
Issues with legacy SPAdes versions
#1317
opened Jun 20, 2024 by
stopguessingwho1am
1 task done
How to use spades operate a fasta file, especially simulated reads in fasta format from badread?
#1305
opened May 22, 2024 by
SoSongzhi
1 task done
Stack trace - The program was terminated by segmentation fault
#1291
opened May 13, 2024 by
emilyn16
1 task done
spades-core: /opt/conda/conda-bld/spades_1664217775513/work/src/project/spades/main.cpp:101: int main(int, char**): Assertion `cfg::get().K >= runtime_k::MIN_K && cfg::get().K < runtime_k::MAX_K' failed.finished abnormally, OS return value: -6
#1284
opened Apr 29, 2024 by
GuillaumeDore11
1 task done
== Error == finished abnormally, OS return value: -11
io
Input / output (e.g. due to disk storage) errors
#1277
opened Apr 16, 2024 by
efe3506
1 task done
I keep runnning into "finished abnormally, err code: -11"
outdated
Issues with legacy SPAdes versions
wsl
Issues with unsupported WSL/WSL2
#1267
opened Mar 28, 2024 by
Wanjofu
1 task done
== Error == system call for: "['/usr/lib/spades/bin/spades-core', '/home/ifb/rnaSPAdemount/K55/configs/config.info', '/home/ifb/rnaSPAdemount/K55/configs/mda_mode.info', '/home/ifb/rnaSPAdemount/K55/configs/rna_mode.info']" finished abnormally, err code: -6
io
Input / output (e.g. due to disk storage) errors
#1262
opened Mar 22, 2024 by
adsas45
1 task done
Error == system call for: ....." finished abnormally, OS return value: -6 None when running rnaspades
#1255
opened Mar 7, 2024 by
komorn
1 task done
The number of contigs generated is significantly lower than expected
#1252
opened Mar 1, 2024 by
liusihang
1 task done
Exception caught Cannot open file XXX/.bin_reads/paired_0.off': iostream error
io
Input / output (e.g. due to disk storage) errors
#1250
opened Feb 27, 2024 by
gorfol
1 task done
finished abnormally, OS return value: -11 and source code intasll error
#1249
opened Feb 27, 2024 by
2110537
1 task done
getting error while running spades.py error : finished abnormally, OS return value: -11
#1248
opened Feb 21, 2024 by
rishidash12
1 task done
Spades not showing any output after starting processing read Two
#1242
opened Feb 8, 2024 by
Shaileshdesai76
1 task done
Is repeat resolution necessary in large-scale metagenomics?
#1241
opened Feb 3, 2024 by
yqy6611
1 task done
spades-core terminated automatically during k-mer counting without errors
#1237
opened Jan 22, 2024 by
yqy6611
1 task done
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