The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration

Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight inputs, segmented masks, skeletons of NGV morphologies and volumes.

ASTROCYTE 1.0. Interactive realistic model of protoplasmic astrocyte. Matlab and NEURON environment

Amyotrophic Lateral Sclerosis (ALS) is a fatal neurodegenerative disease of the adult, characterized by degeneration of motor neurons in the spinal cord, brain stem and motor cortex. There is no bio-informatic model of ALS.

Systematic review of human post-mortem immunohistochemical studies and bioinformatics analyses unveil the complexity of astrocyte reaction in Alzheimer’s disease.

Simulation of neuron-astrocyte network with Brian 2

Disentangling astroglial physiology with a realistic cell model in silico (Savtchenko et al 2018)

Electrodiffusive astrocytic and extracellular ion concentration dynamics model (Halnes et al. 2013)

Spontaneous calcium oscillations in astrocytes (Lavrentovich and Hemkin 2008)

Glutamate-evoked Ca2+ oscillations in single astrocytes (Modified from Dupont et al. 2011)

Simulation of calcium signaling in fine astrocytic processes (Denizot et al 2019)

Reproducibility and comparability of models for astrocyte Ca2+ excitability (Manninen et al 2017)

Glial voltage dynamics driven by Kir & K2P currents (Janjic et al 2023)

Ca2+ oscillations in single astrocytes (Lavrentovich and Hemkin 2008) (python) (Manninen et al 2017)

The role of glutamate in neuronal ion homeostasis: spreading depolarization (Hubel et al 2017)

A model for recurrent spreading depolarizations (Conte et al. 2017)

Mechanisms of extraneuronal space shrinkage (Ostby et al 2009)

Glutamate-evoked Ca2+ oscillations in single astrocytes (De Pitta et al. 2009) (Manninen et al 2017)

A mathematical model of a neurovascular unit (Dormanns et al 2015, 2016) (Farrs & David 2011)

Spontaneous calcium oscillations in single astrocytes (Riera et al. 2011) (Manninen et al 2017)