Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

refactor_global_as_function_inputs #175

Open
wants to merge 4 commits into
base: main
Choose a base branch
from
Open

refactor_global_as_function_inputs #175

Show file tree
Hide file tree
Changes from 3 commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
6f99f13
refactor_global_as_function_inputs
yijianzeng May 24, 2023
15ba5fa
select_input_last_two_options_swap
yijianzeng May 24, 2023
accf754
Fix_Style_Issue
yijianzeng May 24, 2023
64ee609
ResidualMC(1)_index_needed/added
yijianzeng May 30, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
16 changes: 12 additions & 4 deletions src/+equations/calc_rssrbs.m
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,13 @@
function [rss, rbs] = calc_rssrbs(SMC, LAI, rbs)
global SaturatedMC ResidualMC fieldMC
function [rss, rbs] = calc_rssrbs(SMC, LAI, rbs, ResidualMC, fieldMC)
%{
This function is to calculate surface resistance, following C. van der Tol
et al. 2014 (BG). The emperical parameters "aa, 4.1, and 4.3" are
user-defined. And these parameters can be calibrated during winter season
when LAI is low.
%}
aa = 3.8;
rss = exp((aa + 4.1) - aa * (SMC - ResidualMC(1)) / (fieldMC(1) - ResidualMC(1)));
yijianzeng marked this conversation as resolved.
Show resolved Hide resolved
rbs = rbs * LAI / 4.3;
bb = 4.1;
cc = 4.3;

rss = exp((aa + bb) - aa * (SMC - ResidualMC) / (fieldMC - ResidualMC));
rbs = rbs * LAI / cc;
4 changes: 2 additions & 2 deletions src/+io/select_input.m
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
function [SoilProperties, leafbio, canopy, meteo, angles, SpaceTimeInfo] = select_input(ScopeParameters, digitsVector, canopy, options, SpaceTimeInfo, SoilProperties)
function [SoilProperties, leafbio, canopy, meteo, angles, SpaceTimeInfo] = select_input(ScopeParameters, digitsVector, canopy, options, SoilProperties, SpaceTimeInfo)
global Theta_LL theta_s0
SoilProperties.spectrum = ScopeParameters.spectrum(digitsVector(16));
SoilProperties.rss = ScopeParameters.rss(digitsVector(17));
Expand Down Expand Up @@ -82,7 +82,7 @@
SoilProperties.GAM = equations.Soil_Inertia0(SoilProperties.cs, SoilProperties.rhos, SoilProperties.lambdas);
end
if options.calc_rss_rbs
[SoilProperties.rss, SoilProperties.rbs] = equations.calc_rssrbs(SoilProperties.SMC, canopy.LAI, SoilProperties.rbs);
[SoilProperties.rss, SoilProperties.rbs] = equations.calc_rssrbs(SoilProperties.SMC, canopy.LAI, SoilProperties.rbs, SoilProperties.ResidualMC, SoilProperties.fieldMC);
end

if leafbio.Type
Expand Down
4 changes: 2 additions & 2 deletions src/STEMMUS_SCOPE.m
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -212,7 +212,7 @@
ScopeParametersNames = fieldnames(ScopeParameters);
if options.simulation == 1
vi = ones(length(ScopeParametersNames), 1);
[soil, leafbio, canopy, meteo, angles, xyt] = io.select_input(ScopeParameters, vi, canopy, options);
[soil, leafbio, canopy, meteo, angles, xyt] = io.select_input(ScopeParameters, vi, canopy, options, SoilProperties);
[ScopeParameters, xyt, canopy] = io.loadTimeSeries(ScopeParameters, leafbio, soil, canopy, meteo, constants, F, xyt, path_input, options);
else
soil = struct;
Expand Down Expand Up @@ -512,7 +512,7 @@
if options.simulation == 0
vi(vmax == telmax) = k;
end
[soil, leafbio, canopy, meteo, angles, xyt] = io.select_input(ScopeParameters, vi, canopy, options, xyt, soil);
[soil, leafbio, canopy, meteo, angles, xyt] = io.select_input(ScopeParameters, vi, canopy, options, soil, xyt);
if options.simulation ~= 1
fprintf('simulation %i ', k);
fprintf('of %i \n', telmax);
Expand Down