Skip to content

Issues: saezlab/liana-py

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

27 Open 83 Closed
27 Open 83 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Use of .obs features in bivariate statistics enhancement New feature or request
#152 opened Nov 22, 2024 by peterpdu
@dbdimitrov
3
ImportError: cannot import name 'AlignedViewMixin' bug Something isn't working help wanted Extra attention is needed
#150 opened Oct 21, 2024 by 1QiGuo
@dbdimitrov
4
Is CORNETO installation incompatible with LIANA? bug Something isn't working help wanted Extra attention is needed
#149 opened Oct 16, 2024 by jiangzh-coder
@dbdimitrov
3
Obsm 'local_scores' needs to be of one specific type when running li.mt.bivariate bug Something isn't working enhancement New feature or request help wanted Extra attention is needed
#147 opened Oct 2, 2024 by dertrotl
@dbdimitrov
5
li.mt.bivariate: No common columns to perform merge on bug Something isn't working help wanted Extra attention is needed
#143 opened Sep 19, 2024 by rcannood
@dbdimitrov
1
Option to aggregate individual MistyData objects from multiple samples enhancement New feature or request
#141 opened Sep 12, 2024 by whitneyt1
@dbdimitrov
4
get_hcop_orthologs bug Something isn't working help wanted Extra attention is needed
#137 opened Aug 27, 2024 by tuhulab
@dbdimitrov
3
CellChat AttributeError: 'SparseCSRView' object has no attribute 'A' bug Something isn't working help wanted Extra attention is needed
#135 opened Aug 16, 2024 by AmyOlex
@dbdimitrov
5
Guidelines to choose the best parameters for bivariate analysis using Visium HD data bug Something isn't working help wanted Extra attention is needed
#133 opened Aug 13, 2024 by Rafael-Silva-Oliveira
@dbdimitrov
5
Saving Misty model as .pkl enhancement New feature or request
#127 opened Jul 22, 2024 by Zach-Sten
@dbdimitrov
3
Questions about LIANA+ requirement for cell number enhancement New feature or request
#126 opened Jul 19, 2024 by jun-miao113
@dbdimitrov
3
Proper Caching for MetalinksDB & HCOP enhancement New feature or request
#111 opened May 24, 2024 by dbdimitrov
@dbdimitrov
2
Sanity check if liana uses the log normalised values enhancement New feature or request
#104 opened Apr 24, 2024 by ahmetrifaioglu
@dbdimitrov
1
AnnData dtype argument deprecation enhancement New feature or request
#103 opened Apr 19, 2024 by dbdimitrov
@dbdimitrov
Add a tutorial on GPU-accelerated misty enhancement New feature or request
#100 opened Apr 12, 2024 by dbdimitrov
@dbdimitrov
Export Elbow plot from nmf enhancement New feature or request
#99 opened Apr 12, 2024 by dbdimitrov
@dbdimitrov
ZeroDivisionError: float division by zero help wanted Extra attention is needed
#93 opened Mar 25, 2024 by anke-king
@dbdimitrov
10
Move Vignettes to Another Repo documentation Improvements or additions to documentation enhancement New feature or request
#90 opened Feb 21, 2024 by dbdimitrov
@dbdimitrov
Frequency Chord diagram and Heatmap in Python enhancement New feature or request
#85 opened Jan 31, 2024 by maximelepetit
@dbdimitrov
10
move LIANA+ plots to matplotlib and seaborn? [User Opinons Welcome] enhancement New feature or request
#83 opened Jan 26, 2024 by dbdimitrov
@dbdimitrov
5
Implement GPU to speed up the CCC caculation in process of rank_aggregate method (CellChat part)? enhancement New feature or request
#78 opened Dec 19, 2023 by xflicsu
@dbdimitrov
1
Should we exclude CellTalkDB from curated resources list? enhancement New feature or request question Further information is requested
#75 opened Nov 28, 2023 by dbdimitrov
@dbdimitrov
4
Additional metadata in results dataframe enhancement New feature or request
#70 opened Nov 8, 2023 by dnjst
@dbdimitrov
2
Cellphone DB (and other database versions) enhancement New feature or request
#60 opened Sep 22, 2023 by SimonDMurray
2
Add aggregate function for MISTy models (extend plots) enhancement New feature or request
#56 opened Sep 7, 2023 by PauBadiaM
@dbdimitrov
3
ProTip! Adding no:label will show everything without a label.