Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Implement GPU to speed up the CCC caculation in process of rank_aggregate method (CellChat part)? #78

Open
xflicsu opened this issue Dec 19, 2023 · 1 comment
Assignees
Labels
enhancement New feature or request

Comments

@xflicsu
Copy link

xflicsu commented Dec 19, 2023

Hello, very powerful method to prediction CCC from scRNA-seq.
When I try to use the "li.mt.rank_aggregate", the CellChat run slowly.
Would you speed up the process based on GPU?

Thanks!

@xflicsu xflicsu added the enhancement New feature or request label Dec 19, 2023
@dbdimitrov
Copy link
Collaborator

Hi @xflicsu, I implemented parallel processing for all permutation methods and will be possible from next update.

re GPU-enabled computation: this might be a bit down the line, but it is planned :)

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

2 participants