Master release/1.9.0

.clang-format

@@ -58,7 +58,30 @@ ForEachMacros:
   - foreach
   - Q_FOREACH
   - BOOST_FOREACH
-IncludeIsMainRegex: '([-_](test|unittest))?$'
+IncludeBlocks: Regroup
+IncludeCategories:
+  - Regex:    '^<oneapi/dpl.*'  # needs to be on top
+    Priority: -2
+  - Regex:    '<[^.]+>'  # standard library
+    Priority: 1
+  - Regex:    '(^<(hip/hip_runtime|cuda(_runtime)?)\.h)|common/cuda_hip/base/runtime\.hpp$'
+    Priority: 2
+    SortPriority: 2
+  - Regex:    '^<(omp|cu|hip|oneapi|thrust|CL/|cooperative|mpi|nvToolsExt|Kokkos).*'
+    Priority: 2
+    SortPriority: 3
+  - Regex:    '^<(nlohmann|gflags|gtest|sde_lib|papi).*'
+    Priority: 4
+  - Regex:    '<ginkgo/ginkgo.hpp>'
+    Priority: 6
+  - Regex:    '^<ginkgo/.*'
+    Priority: 7
+  - Regex:    '^<.*'  # other library includes
+    Priority: 5
+  - Regex:    '^.*'
+    Priority: 8
+IncludeIsMainRegex: '(_(stub|kernels|kernels2|test))?$'
+IncludeIsMainSourceRegex: '\.cu$|_kernels\.hpp$|\.dp\.cpp$'
 IndentCaseLabels: false
 IndentWidth:     4
 IndentWrappedFunctionNames: false

.github/bot-pr-base.sh

@@ -3,8 +3,6 @@
 source .github/bot-base.sh
 
 EXTENSION_REGEX='\.(cuh?|hpp|hpp\.inc?|cpp)$'
-FORMAT_HEADER_REGEX='^(benchmark|core|cuda|hip|include/ginkgo/core|omp|reference|dpcpp|common/unified|test)/'
-FORMAT_REGEX='^(common|examples)/'
 CLANG_FORMAT=clang-format-14
 
 echo -n "Collecting information on triggering PR"

.github/bot-pr-format-base.sh

@@ -14,9 +14,7 @@ git config user.name "ginkgo-bot"
 
 # save scripts from develop
 cp .clang-format .pre-commit-config.yaml /tmp
-pushd dev_tools/scripts || exit 1
-cp format_header.sh update_ginkgo_header.sh /tmp
-popd || exit 1
+cp dev_tools/scripts/update_ginkgo_header.sh /tmp
 
 # checkout current PR head
 LOCAL_BRANCH=format-tmp-$HEAD_BRANCH
@@ -25,7 +23,6 @@ git checkout -b $LOCAL_BRANCH fork/$HEAD_BRANCH
 # restore files from develop
 cp /tmp/.clang-format .
 cp /tmp/.pre-commit-config.yaml .
-cp /tmp/format_header.sh dev_tools/scripts/
 cp /tmp/update_ginkgo_header.sh dev_tools/scripts/
 
 # make base pre-commit config available

.github/workflows/intel.yml

@@ -33,20 +33,20 @@ jobs:
     - name: configure
       run: |
         source /etc/profile
-        module load intel-oneapi-compilers intel-oneapi-dpl intel-oneapi-mkl intel-oneapi-tbb cmake
+        module load intel-oneapi-compilers intel-oneapi-dpl intel-oneapi-mkl cmake
         mkdir build
         cd build
         cmake .. -DCMAKE_INSTALL_PREFIX=install_ginkgo -DCMAKE_CXX_FLAGS="-Wpedantic -ffp-model=precise" -DCMAKE_CXX_COMPILER=${{ matrix.config.compiler }} -DCMAKE_BUILD_TYPE=${{ matrix.config.build_type }} -DGINKGO_MIXED_PRECISION=${{ matrix.config.mixed }} -DGINKGO_BUILD_CUDA=OFF -DGINKGO_BUILD_HIP=OFF -DGINKGO_BUILD_MPI=OFF -DGINKGO_DPCPP_SINGLE_MODE=ON
         make -j8
         ONEAPI_DEVICE_SELECTOR=level_zero:gpu ctest -j10 --output-on-failure
-
+ 
     - name: install
       run: |
         source /etc/profile
-        module load intel-oneapi-compilers intel-oneapi-dpl intel-oneapi-mkl intel-oneapi-tbb cmake
+        module load intel-oneapi-compilers intel-oneapi-dpl intel-oneapi-mkl cmake
         cd build
         SYCL_DEVICE_FILTER=level_zero:gpu make install
         export GINKGO_PATH="$(pwd)/install_ginkgo/lib"
-        export LIBRARY_PATH=${GINKGO_PATH}:$LIBRARY_PATH
-        export LD_LIBRARY_PATH=${GINKGO_PATH}:$LD_LIBRARY_PATH
+        export LIBRARY_PATH=${ICL_INTEL_TBB_ROOT}/lib64:${GINKGO_PATH}:$LIBRARY_PATH
+        export LD_LIBRARY_PATH=${ICL_INTEL_TBB_ROOT}/lib64:${GINKGO_PATH}:$LD_LIBRARY_PATH
         SYCL_DEVICE_FILTER=level_zero:gpu make test_install