Master release/1.9.0#1748

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MarcelKoch wants to merge 446 commits intomasterfrom master-release/1.9.0

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Commits on Dec 9, 2024

[core] remove unused #undef
MarcelKoch
committed
temporarily disable oneAPI CI jobs

upsj
authored and
MarcelKoch
committed
Simplify the testing types

Thomas Grützmacher
authored and
MarcelKoch
committed
Use new type aliases in relevant tests

Thomas Grützmacher
authored and
MarcelKoch
committed
Add documentation for the new type alias

Thomas Grützmacher
authored and
MarcelKoch
committed
Update documentation for type list helper

Thomas Grützmacher
authored and
MarcelKoch
committed
Remove unsigned type from MPI bindings tests

thoasm
authored and
MarcelKoch
committed
Properly format files

thoasm
authored and
MarcelKoch
committed
Review updates

authored and
MarcelKoch
committed
squeeze memory dispatch

yhmtsai
and
MarcelKoch
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clear unused version switch macro and change the badge

yhmtsai
authored and
MarcelKoch
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add file config example with the configs

yhmtsai
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MarcelKoch
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update build.sh to c++17 in example

yhmtsai
and
MarcelKoch
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add test and update documentation

committed
add missing example link

yhmtsai
and
MarcelKoch
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use milliseconds directly and update documentation

authored and
MarcelKoch
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fix windows execution test by using std::filesystem

yhmtsai
authored and
MarcelKoch
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[core] allow filling the device_matrix_data
MarcelKoch
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[core] remove zero initialization
MarcelKoch
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[batch] fix parameter ordering/naming
MarcelKoch
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[fact] extract l/u initialization
MarcelKoch
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[prec] implement SOR preconditioner reference kernels
MarcelKoch
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[prec] add SOR core + ref tests
MarcelKoch
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[prec] add sor parsing
MarcelKoch
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[prec] implement Gauß-Seidel preconditioner
MarcelKoch
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[prec] add gauss seidel parsing
MarcelKoch
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[sor] review updates:

MarcelKoch
and
yhmtsai
committed
[prec] split up common impl of sor
MarcelKoch
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[prec] implement omp sor kernels
MarcelKoch
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[prec] implement sycl sor kernels
MarcelKoch
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[prec] implement cuda/hip sor kernels
MarcelKoch
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[prec] add sor device test
MarcelKoch
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[prec] add sor to benchmarks
MarcelKoch
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[test] add missing factorization tests
MarcelKoch
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[cuda] remove pre cuda 11 code

MarcelKoch
and
upsj
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[doc] fixes formulas for Sor
MarcelKoch
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add workspace for intermediate data

yhmtsai
authored and
MarcelKoch
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apply_uses_initial_guess return the local solvers' value

yhmtsai
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MarcelKoch
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use vector cache

yhmtsai
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MarcelKoch
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move VectorCache into experimental::distributed

authored and
MarcelKoch
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fix typo of rcm

yhmtsai
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MarcelKoch
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[ci] add benchmark tests with complex types
MarcelKoch
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[ci] add generated benchmark test reference
MarcelKoch
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[bench] fix residual norm logger for complex
MarcelKoch
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fixup! [ci] add benchmark tests with complex types
MarcelKoch
committed
review updates:

MarcelKoch
and
yhmtsai
committed
run Intel CI jobs on cluster

upsj
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MarcelKoch
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fix slow OpenMP example execution

upsj
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MarcelKoch
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fix factorization test precision

upsj
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MarcelKoch
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check sparsity pattern of SOR initialize kernels

upsj
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MarcelKoch
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fix kernel parameter passing for SOR DPCPP kernels

upsj
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MarcelKoch
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fix CI config

upsj
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MarcelKoch
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disable static oneAPI builds

upsj
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MarcelKoch
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create the context for each intel device.

yhmtsai
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MarcelKoch
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[sycl] don't use deprecated release_matrix_handle and set_csr_data
MarcelKoch
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[sycl] remove deprecated is_host()

yhmtsai
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MarcelKoch
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[sycl] use group algorithm not member functions from subgroup, which are removed in oneapi-2025.0.0

yhmtsai
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MarcelKoch
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Format files

ginkgo-bot
and
MarcelKoch
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[sycl] add missing namespace
MarcelKoch
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[sycl] use atomic_ref instead of deprecated atomic
MarcelKoch
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[sycl] use local_accessor instead of deprecated access::target::local
MarcelKoch
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[sycl] use newer MKL target if available
MarcelKoch
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[sycl] use non-deprecated MKL call only after v2024
MarcelKoch
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[batch] provide default index type for matrix device types
MarcelKoch
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[batch] handle constness of index type same as value type
MarcelKoch
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[batch] add macro to instantiate batched solver
MarcelKoch
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[batch] split bicgstab compilation (hip)
MarcelKoch
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[batch] split bicgstab compilation (cuda)
MarcelKoch
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[batch] split cg compilation (hip)
MarcelKoch
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[batch] split cg compilation (cuda)
MarcelKoch
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[batch] review updates:

MarcelKoch
and
pratikvn
committed
[batch] add launch bounds and fix register check
MarcelKoch
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[batch] add macro indirection

MarcelKoch
and
upsj
committed
[batch] unify batch solver
MarcelKoch
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[batch] split batch solver (sycl)
MarcelKoch
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[core] add instantiation macro with variable args
MarcelKoch
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[batch] switch order of batch dispatch and value instantiation macros
MarcelKoch
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[batch] fix windows build
MarcelKoch
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[fact] fix cuda 11.0 namespace issue
MarcelKoch
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[ci] use oldest cuda version in regular CI
MarcelKoch
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[ci] keep cuda 11.4 image for sonarcloud
MarcelKoch
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try clang_cl

yhmtsai
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MarcelKoch
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make class/struct consistent

yhmtsai
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MarcelKoch
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fix order

yhmtsai
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MarcelKoch
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friend class is not in the nearest enclosing namesace

yhmtsai
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MarcelKoch
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fix the function declaration of definition different from declaration in instantiation

yhmtsai
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MarcelKoch
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alias in template will lead an issue

yhmtsai
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MarcelKoch
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Revert "try clang_cl"

yhmtsai
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MarcelKoch
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casting in core only

yhmtsai
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MarcelKoch
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fix test solve_lambda

yhmtsai
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MarcelKoch
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msys

yhmtsai
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MarcelKoch
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also seperate config to another library in mingw (including msys2/clang)

yhmtsai
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MarcelKoch
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use -fno-assume-unique-vtables to make dyanmic_cast to the final class work

yhmtsai
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MarcelKoch
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reuse the macro from another pr

yhmtsai
and
MarcelKoch
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make the macro stack clear

yhmtsai
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MarcelKoch
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add GKO_INDIRECT to properly expand the __VA_ARGS__ in msvc

yhmtsai
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MarcelKoch
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no way to face nullptr preconditioner in batch apply

yhmtsai
and
MarcelKoch
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Revert "msys"

yhmtsai
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MarcelKoch
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Enable file-config conditionally

pratikvn
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MarcelKoch
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move find_package to root CMakeLists.txt

pratikvn
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MarcelKoch
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always pull in json support with examples enabled

pratikvn
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MarcelKoch
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use compile flag internally for THRUST_CUB_WRAPPED_NAMESPACE

yhmtsai
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MarcelKoch
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avoid cpp see thrust

yhmtsai
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MarcelKoch
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adapt the test with custom thrust/cub namespace

yhmtsai
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MarcelKoch
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add GINKGO_CUSTOM_THRUST_NAMESPACE option

yhmtsai
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MarcelKoch
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split custom_thrust_namespace to cuda/hip and disable them if no-effect or not-full-support

yhmtsai
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MarcelKoch
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enable the option by default and update documentation

authored and
MarcelKoch
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do not expose the custom namespace option to user

authored and
MarcelKoch
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update cuda arch for list and selector

yhmtsai
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MarcelKoch
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missing change from custom thrust namespace

yhmtsai
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MarcelKoch
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[ci] disable threadsanitizer temporarily
MarcelKoch
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Add overlap communication to read_distributed

Fritz Goebel
authored and
MarcelKoch
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Add reference kernel tests

Fritz Goebel
authored and
MarcelKoch
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Add device kernels and tests

Fritz Goebel
authored and
MarcelKoch
committed
Address Review comments

Fritz Goebel
authored and
MarcelKoch
committed
Small fixes

Fritz Goebel
authored and
MarcelKoch
committed
Add missing include

Fritz Goebel
authored and
MarcelKoch
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Fix circular dependency with array.fill

Fritz Goebel
authored and
MarcelKoch
committed
Address Review comments

fritzgoebel
authored and
MarcelKoch
committed
Move additive read distributed to free function

fritzgoebel
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MarcelKoch
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Add documentation for the assemble function

fritzgoebel
authored and
MarcelKoch
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Address review comments

fritzgoebel
authored and
MarcelKoch
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Move fill_send_buffers to unified kernels

fritzgoebel
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MarcelKoch
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Address review comments

fritzgoebel
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MarcelKoch
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Adress review comments

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Fix multiple definitions in dpcpp

fritzgoebel
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MarcelKoch
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Move assembly_helpers to assembly

fritzgoebel
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MarcelKoch
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add failed test when given symbolic without fillin.

yhmtsai
authored and
MarcelKoch
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fix infinite loop of lookup_hash_unsafe and add test in reference

yhmtsai
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MarcelKoch
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add checked_lookup into LU

yhmtsai
authored and
MarcelKoch
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add ilu syncfree through lu implementation

yhmtsai
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MarcelKoch
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update the documentation, change checked_lookup -> has_full_fillin (opposite behavior).

authored and
MarcelKoch
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use unpack directly from factorization and add unpack with strategy

yhmtsai
authored and
MarcelKoch
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remove the duplicated initialization

yhmtsai
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MarcelKoch
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Revert "use unpack directly from factorization and add unpack with strategy" to avoid new strategy input

yhmtsai
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MarcelKoch
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update documentation

yhmtsai
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MarcelKoch
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cholesky failed test

yhmtsai
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MarcelKoch
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move the algorithm enum to another header

yhmtsai
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MarcelKoch
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cholesky with safe lookup, wrap it into Ic, and add some missing tests

yhmtsai
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MarcelKoch
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copy the call from lu/cholesky to ilu/ic and delete full_fillin

authored and
MarcelKoch
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refine the wording and fix wrong bool value

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MarcelKoch
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update to incomplete_factorization and throw with omp using sparselib

yhmtsai
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MarcelKoch
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fix Ref also considered as Omp executor

yhmtsai
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MarcelKoch
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use if constexpr when it is possible and reverse if-else

authored and
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half base type

yhmtsai
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MarcelKoch
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half does not have constexpr constructor

yhmtsai
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MarcelKoch
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fix the undefined behavior and the issue from big-endian, and extract half to another test

yhmtsai
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MarcelKoch
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jacobi use __half in device not gko::half now

yhmtsai
authored and
MarcelKoch
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type map

yhmtsai
authored and
MarcelKoch
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fix error: non-constant-expression cannot be narrowed

yhmtsai
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MarcelKoch
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update gdb-ginkgo

yhmtsai
and
MarcelKoch
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make half not rely on type

yhmtsai
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MarcelKoch
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collect the reused part and undef after usage

yhmtsai
and
MarcelKoch
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use memcpy not std::memcpy in hip

yhmtsai
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MarcelKoch
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add alignment

yhmtsai
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MarcelKoch
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delete the sycl half test as we do not enable it directly

yhmtsai
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MarcelKoch
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use reference for half when it is possible

yhmtsai
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MarcelKoch
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instantiation/testing/next/prev/stub type definition

yhmtsai
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half option

yhmtsai
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device type mapping

yhmtsai
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consider custom namespace for thrust::complex<__half> and benchmark

yhmtsai
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atomic and cooperative_groups

yhmtsai
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fix math and device_numeric_limit

yhmtsai
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array operation in half

yhmtsai
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matrix with half

yhmtsai
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device_matrix_data and mtx_io

yhmtsai
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components such as array/iterator/segmented_array test with half

yhmtsai
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matrix test with half

yhmtsai
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base such as composition/combination with half and corr. test

yhmtsai
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test_utils test

yhmtsai
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constexpr restriction for nvc++

yhmtsai
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cuda with CC<70 and hip do not support 16 bit atomic. throw error or fallback to a working version if it is the case for matrix

yhmtsai
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implement half shuffle via 32 bit impl

yhmtsai
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config

yhmtsai
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residual with half

yhmtsai
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residual norm default reduction_factor respect to precision

yhmtsai
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MarcelKoch
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residual config dispatch

yhmtsai
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krylov solver

yhmtsai
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solver config dispatch

yhmtsai
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cuda with CC<70 and hip do not support 16 bit atomic. throw error for idr

yhmtsai
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triangular and direct solver

yhmtsai
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workaround for half precision of load/store by using single precision in shared memory

yhmtsai
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delete the current unusable half memory op on shared memory

yhmtsai
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direct and tri config dispatch

yhmtsai
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factorization

yhmtsai
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factorization config dispatch

yhmtsai
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cmake cuda test with cuda arch and fix is_finite

yhmtsai
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figure out factorization test

yhmtsai
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change the diagonal to reduce random on parilut/parict

yhmtsai
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multigrid and the multigridlevel

yhmtsai
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pgm uses gko::max to avoid ambiguous in hip

yhmtsai
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multigrid config dispatch

yhmtsai
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preconditioner with half

yhmtsai
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preconditioner config dispatch

yhmtsai
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reorder with half

yhmtsai
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MarcelKoch
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change the default mc64 tolerance respect to precision

yhmtsai
and
MarcelKoch
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log with half

yhmtsai
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dispatch with distributed needs to throw with half

yhmtsai
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revert the distribution value_type in dpcpp/test/preconditioner/jacobi_kernels to make them work with single

yhmtsai
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fix distributed mixed-precision pgm

yhmtsai
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MarcelKoch
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fix type_size_impl for thrust::complex

yhmtsai
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MarcelKoch
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do not support half for nvhpc23.3 due to signal 11

yhmtsai
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MarcelKoch
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split config to different file to overcome nvhpc limit

yhmtsai
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MarcelKoch
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make test target_name aligned with binary name, split isai due to nvhpc limitation

yhmtsai
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batch with half

yhmtsai
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batch test with half

yhmtsai
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cuda/hip batch changes

yhmtsai
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add device_type in sycl

yhmtsai
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add device_type in kernel_launch

yhmtsai
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reduction sycl type

yhmtsai
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component sycl type

yhmtsai
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matrix sycl type

yhmtsai
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factorization sycl type

yhmtsai
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solver/preconditioner/stop sycl type

yhmtsai
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factorization

yhmtsai
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matrix

yhmtsai
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preconditioner

yhmtsai
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solver

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stop

yhmtsai
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sycl half

yhmtsai
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fix template expect argument

yhmtsai
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intel sycl introduces silent complex header loading chain.

yhmtsai
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replace CL/sycl.hpp by sycl/sycl.hpp

yhmtsai
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sycl does not support 16 bit atomic. throw error or fallback to working version

yhmtsai
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only provide the custom operation for complex<half>

yhmtsai
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move to gko::complex<sycl::half> alone

yhmtsai
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update docuementation

yhmtsai
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rename precision chain

yhmtsai
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rename instantiation

yhmtsai
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rename testing type

yhmtsai
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rename type list

yhmtsai
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manual changes

yhmtsai
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remove unused data and type

yhmtsai
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update the multigrid preconditioner usage in test/mpi/solver

yhmtsai
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add overload to create json obj from std::string

greole
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[test] add parse_json_string test

greole
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MarcelKoch
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[test] add parse_json_string test

greole
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disable the half properly

yhmtsai
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update documentation

yhmtsai
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MarcelKoch
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[omp] fix RCM RAW
MarcelKoch
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[omp] fix sparsity csr RAW
MarcelKoch
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[omp] fix kcycle stop WAW
MarcelKoch
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[test] fix 3pt generation for batch solver
MarcelKoch
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[omp] fix par IC and variants using atomic load/stores
MarcelKoch
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[mg] use atomics for match_edge
MarcelKoch
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[core] deprecate the master branch
MarcelKoch
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[ci] disable CI on master
MarcelKoch
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[release] update gtest
MarcelKoch
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[release] update changelog

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[release] fix changelog
MarcelKoch
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