Bulk: bioconda-utils v3.3.0 #55
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aliciaaevans
commented
Jun 3, 2024
aliciaaevans
commented
- Update bulk to match master
- Use new bioconda-utils version with updated pinnings
> ### Bug Fixes > > * update anaconda-client=1.12 to fix uploads ([#970](https://www.github.com/bioconda/bioconda-utils/issues/970)) ([06dcacc](https://www.github.com/bioconda/bioconda-utils/commit/06dcacca60c17c1a97770e14ae6348ac7acbe9a6)) refs: - https://github.com/bioconda/bioconda-utils/releases/tag/v2.13.2 - bioconda/bioconda-utils#970 Signed-off-by: Marcel Bargull <[email protected]>
> ### Features > > * Add support for .conda format ([#981](https://www.github.com/bioconda/bioconda-utils/issues/981)) ([125c9ea](https://www.github.com/bioconda/bioconda-utils/commit/125c9ea5e362b7e5e63dfcbfae995fa3eeb58ce8)) > * choose worker recipes by depth level ([#950](https://www.github.com/bioconda/bioconda-utils/issues/950)) ([4c51ae3](https://www.github.com/bioconda/bioconda-utils/commit/4c51ae31158b0154cf3ed381c4a3ad8b9bff7f14)) > * Update dependencies to latest versions ([#972](https://www.github.com/bioconda/bioconda-utils/issues/972)) ([dc6ca07](https://www.github.com/bioconda/bioconda-utils/commit/dc6ca07a977dfbf7cbc2d25f884dc0333d611116)) > * Use conda/conda-build instead of mamba/conda-mambabuild ([#980](https://www.github.com/bioconda/bioconda-utils/issues/980)) ([17cbc7f](https://www.github.com/bioconda/bioconda-utils/commit/17cbc7fb411864c7c22ff33b40682c0f43e016cc)) > > > ### Bug Fixes > > * handle PR list with no items ([#975](https://www.github.com/bioconda/bioconda-utils/issues/975)) ([869577a](https://www.github.com/bioconda/bioconda-utils/commit/869577a76933c2d7bcf386c1179ef454bdc18543)) > * Ignore src_cache for container-built packages ([125c9ea](https://www.github.com/bioconda/bioconda-utils/commit/125c9ea5e362b7e5e63dfcbfae995fa3eeb58ce8)) > * Ignore Zstandard-packed repodata artifact ([125c9ea](https://www.github.com/bioconda/bioconda-utils/commit/125c9ea5e362b7e5e63dfcbfae995fa3eeb58ce8)) > * use circleci api v1.1 to avoid login error ([#982](https://www.github.com/bioconda/bioconda-utils/issues/982)) ([ebafe92](https://www.github.com/bioconda/bioconda-utils/commit/ebafe92ae01dc4a573e861764a4e837bd1321af3)) refs: - https://github.com/bioconda/bioconda-utils/releases/tag/v2.15.0 --------- Fix conda index call; replace mamba with conda --------- Signed-off-by: Marcel Bargull <[email protected]>
> ### Bug Fixes > > * test_package for .tar.bz2 and .conda ([#983](https://www.github.com/bioconda/bioconda-utils/issues/983)) ([c683290](https://www.github.com/bioconda/bioconda-utils/commit/c683290319d4f148644972b6caf626be6d1c6c99)) refs: - https://github.com/bioconda/bioconda-utils/releases/tag/v2.15.1 Signed-off-by: Marcel Bargull <[email protected]>
…ackage format (#54) Changes since `bioconda-utils v2.15.1`: > ### ⚠ BREAKING CHANGES > > * Separate docs-only requirements (#986) > * Remove defaults channel dependency (#985) > > ### Miscellaneous Chores > > * Remove defaults channel dependency ([#985](https://www.github.com/bioconda/bioconda-utils/issues/985)) ([eb043dc](https://www.github.com/bioconda/bioconda-utils/commit/eb043dc2649bcdf63c11f19993660b58ec215cb7)) > * Separate docs-only requirements ([#986](https://www.github.com/bioconda/bioconda-utils/issues/986)) ([09d108e](https://www.github.com/bioconda/bioconda-utils/commit/09d108e796cb4fce317c475b7d26bbaea124619c)) > > ### Features > > * Update base-glibc-*-bash images to 3.1 ([#996](https://www.github.com/bioconda/bioconda-utils/issues/996)) ([e7c6ca0](https://www.github.com/bioconda/bioconda-utils/commit/e7c6ca0bf7bf2a0815c694634e45d7dff0aa483a)) > > * Update dependencies to latest versions ([#992](https://www.github.com/bioconda/bioconda-utils/issues/992)) ([8c0fe35](https://www.github.com/bioconda/bioconda-utils/commit/8c0fe3548e8087a82050d8cefcfe01e909e61c01)) > > ### Bug Fixes > > * Pass pkg_format to container-based build ([#994](https://www.github.com/bioconda/bioconda-utils/issues/994)) ([e3f23ed](https://www.github.com/bioconda/bioconda-utils/commit/e3f23ed70300d97a8f99c5bace7dbba0f559bd19)) refs: - https://github.com/bioconda/bioconda-utils/releases/tag/v3.2.0 - https://github.com/bioconda/bioconda-utils/releases/tag/v3.1.0 - https://github.com/bioconda/bioconda-utils/releases/tag/v3.0.0 - bioconda/bioconda-recipes#48214 ---- Common config changes: - Set `pkg_format=2` (i.e., build `.conda` not `.tar.bz2`) - Remove `defaults` channel --------- Signed-off-by: Marcel Bargull <[email protected]>
refs: - conda/infrastructure#950 Signed-off-by: Marcel Bargull <[email protected]>
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