This repository contains the introductory slides and the materials, slides and practical, for the course part related to time-course experiments. The practical requires the installation of several R-packages. In particular the ragt2ridges package, which implements most of the discussed methodology.
Materials:
WNvanWieringen_NetworkModelling4HDdata_Intro.pdf: Slides of introduction to network modelling.WNvanWieringen_NetworkModelling4HDdata_TimeCourses.pdf: Slides with exercises to network modelling for time-course omics data.VARpractical.html: R-code, solutions and exercises with additional explanations.VARpractical.pdf: R-code, solutions and exercises with additional explanations (pdf-version of the former).VARpractical_codeOnly.R: Bare R-code from the previous two files.
This repository, all materials, can be downloaded by pressing the green 'Clone or download' button and choosing 'Download ZIP'.
Other materials of the course can be found at: https://github.com/CFWP/MultiOmics-NetworksCourse