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Add MPRF profiler to WW3 #8

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chegermiller pushed a commit that referenced this pull request May 31, 2023
* Added boundary checks to the SMC grid input files for ww3_grid,
to ensure they comply with the limits of the nameslist.

* Fb 360 calendar (#8)

Changes to add support to 360-day and 365-day (no leap year) calendar - see ticket NOAA-EMC#209
  * Additional CALTYPE namelist parameter in MISC section
  * New ww3_tc1 regtest.

* RTD support for ww3_boun[dc] (#10)

* Updated ww3_bound and ww3_bounc to handle model grids formulated on a rotated pole.
* Manual and nml/inp files to updated clarify that ww3_bound/ww3_bounc only accept input spectra formulated on a standard pole grid.

* Fb coupling time (#9)

Updates to allow a coupling time step that is different from the model time step. 
* Includes new regtest (in ww3_tp2.14) for non-default oasis time step.
* ww3_tp2.14 regtest added to matrix.base.

* bug fix for ukmet development

* see issue NOAA-EMC#245

this is a bug introduced with the last PR from UKMO
ukmo-waves#8: 360 day climate calendar

in ww3_trnc.ftn
END CASE
should be replaced by
END SELECT

Co-authored-by: lewis.sampson <[email protected]>
Co-authored-by: Juan Manuel Castillo Sanchez <[email protected]>
Co-authored-by: Chris Bunney <[email protected]>
chegermiller pushed a commit that referenced this pull request May 31, 2023
* Added boundary checks to the SMC grid input files for ww3_grid,
to ensure they comply with the limits of the nameslist.

* Fb 360 calendar (#8)

Changes to add support to 360-day and 365-day (no leap year) calendar - see ticket NOAA-EMC#209
  * Additional CALTYPE namelist parameter in MISC section
  * New ww3_tc1 regtest.

* RTD support for ww3_boun[dc] (#10)

* Updated ww3_bound and ww3_bounc to handle model grids formulated on a rotated pole.
* Manual and nml/inp files to updated clarify that ww3_bound/ww3_bounc only accept input spectra formulated on a standard pole grid.

* Fb coupling time (#9)

Updates to allow a coupling time step that is different from the model time step. 
* Includes new regtest (in ww3_tp2.14) for non-default oasis time step.
* ww3_tp2.14 regtest added to matrix.base.

* bug fix for ukmet development

* Updating develop with a change to allow code build using non-standard NetCDF libraries using alphabetical characters in their version name.

Co-authored-by: lewis.sampson <[email protected]>
Co-authored-by: Juan Manuel Castillo Sanchez <[email protected]>
Co-authored-by: Chris Bunney <[email protected]>
Co-authored-by: Ali Abdolali <[email protected]>
chegermiller pushed a commit that referenced this pull request May 31, 2023
* Added boundary checks to the SMC grid input files for ww3_grid,
to ensure they comply with the limits of the nameslist.

* Fb 360 calendar (#8)

Changes to add support to 360-day and 365-day (no leap year) calendar - see ticket NOAA-EMC#209
  * Additional CALTYPE namelist parameter in MISC section
  * New ww3_tc1 regtest.

* RTD support for ww3_boun[dc] (#10)

* Updated ww3_bound and ww3_bounc to handle model grids formulated on a rotated pole.
* Manual and nml/inp files to updated clarify that ww3_bound/ww3_bounc only accept input spectra formulated on a standard pole grid.

* Fb coupling time (#9)

Updates to allow a coupling time step that is different from the model time step. 
* Includes new regtest (in ww3_tp2.14) for non-default oasis time step.
* ww3_tp2.14 regtest added to matrix.base.

* bug fix for ukmet development

* Periodicity fix for global unstructured grids

 - Corrects calculation of element areas and edge lengths across the
   dateline in w3triamd.ftn

 - Fixes calculation to determine whether a point is inside an element
   that spans the dateline in w3triamd.ftn

 - Corrects calculation of element centers and corners across dateline
   in wmscrpmd.ftn

 - Write out SCRIP file in netCDF format at the end of ww3_grid
   (for creating offline remaping files). This required adding netCDF support
   to ww3_grid

 - Also includes minor fix for the /O7a switch in w3iopomd.ftn

* modify the model/ftn/w3triamd.ftn and model/ftn/wmscrpmd.ftn and change from global grids from min(longitude)=-180, max(longitude)=180 to \delta(longitude)=360 degrees and added the regression test ww3_tp2.21

* bug fix for ww3_grid make without SCRIP switch

* Fix for corner node periodicity in wmscrpmd.ftn

* PDLIB/yowpdlibmain.ftn: fix to handle global meshes

* bug fix for SCRIPNC switch

* update info for ww3_tp2.21 for domain decomposition and PDLIB option

* fix for mww3_04 link with SCRIP and SCRIPNC switch

* add inputs to tar file, update model/bin/ww3_from_ftp.sh and remove inputs from ww3_tp2.21

* reduce the duration of ww3_tp2.21 for the sake of regtest time

* small editorial fixes

* fixes for SCRIPNC switch

* change date for ww3_ounf and ww3_ounp for ww3_tp2.21

* edit w3_make

Co-authored-by: lewis.sampson <[email protected]>
Co-authored-by: Juan Manuel Castillo Sanchez <[email protected]>
Co-authored-by: Chris Bunney <[email protected]>
Co-authored-by: Ali Abdolali <[email protected]>
Co-authored-by: Steven Brus <[email protected]>
Co-authored-by: Steven Brus <[email protected]>
Co-authored-by: Lorenzo Mentaschi <[email protected]>
chegermiller pushed a commit that referenced this pull request May 31, 2023
* Added boundary checks to the SMC grid input files for ww3_grid,
to ensure they comply with the limits of the nameslist.

* Fb 360 calendar (#8)

Changes to add support to 360-day and 365-day (no leap year) calendar - see ticket NOAA-EMC#209
  * Additional CALTYPE namelist parameter in MISC section
  * New ww3_tc1 regtest.

* RTD support for ww3_boun[dc] (#10)

* Updated ww3_bound and ww3_bounc to handle model grids formulated on a rotated pole.
* Manual and nml/inp files to updated clarify that ww3_bound/ww3_bounc only accept input spectra formulated on a standard pole grid.

* Fb coupling time (#9)

Updates to allow a coupling time step that is different from the model time step. 
* Includes new regtest (in ww3_tp2.14) for non-default oasis time step.
* ww3_tp2.14 regtest added to matrix.base.

* bug fix for ukmet development

* add the matrix subsetter

* clean-up

* clean up

* add another script which separate serial and parallel jobs and divide them

* modify the script to remove ../model? after test completion.

* bug fixes and adding ww3_tp2.17 to list_heavy

* add if statement to remove matrix? and model?

* Update matrix_divider_p.sh

* Merge remote-tracking branch 'upstream/develop' into fb_matrix_divider

* Merge remote-tracking branch 'upstream/develop' into fb_matrix_divider

* put if check for ../model? inside matrix? loop

* fix the bug for sed for model?

* final fix for extra model? removal

* add 2.21 to the list_heavy

Co-authored-by: lewis.sampson <[email protected]>
Co-authored-by: Juan Manuel Castillo Sanchez <[email protected]>
Co-authored-by: Chris Bunney <[email protected]>
Co-authored-by: Ali Abdolali <[email protected]>
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