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Unit tests for SlurmProxy to baseline current behavior. #1337

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merged 11 commits into from
Aug 22, 2024
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needed to lock down baseline behavior of SlurmProxy with respect to Slurm submission scripts for all solvers.

This is in preparation for future refactoring of Singularity containers which are solver specific. For example simulations will be executed via:

  • ghcr.io/virtualcell/vcell-batch: (Java-based Preprocessing/Postprocessing, Java-based solvers, SpringSalad native solver)
  • ghcr.io/virtualcell/vcell-fvsolver: (FiniteVolume and Smoldyn solvers)
  • ghcr.io/virtualcell/vcell-solvers: (CVODE/NFSim/Stoch/Hybrid-stoch/MovingBoundary)

@jcschaff jcschaff self-assigned this Aug 22, 2024
@jcschaff jcschaff merged commit 2faada1 into master Aug 22, 2024
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@jcschaff jcschaff deleted the decouple-batch branch August 22, 2024 15:20
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