Update Genome count #137
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: Update Genome count | |
on: | |
workflow_dispatch: | |
schedule: | |
- cron: '00 23 * * 0' | |
jobs: | |
update-citations: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout Branch | |
uses: actions/checkout@v2 | |
- name: Setup Python | |
uses: actions/setup-python@v2 | |
with: | |
python-version: '3.9' | |
- name: Install dependencies | |
run: | | |
python -m pip install pandas | |
- name: Run update script | |
run: python annotate_genome_count.py | |
- name: Create Pull Request | |
uses: peter-evans/create-pull-request@v3 | |
with: | |
commit-message: Update VGP/ERGA Genome count | |
title: Update VGP/ERGA Genome count | |
body: | | |
This is an auto-generated PR with the updated `genome count` of the [Galaxy Assembly](https://assembly.usegalaxy.eu) site. | |
branch: update-genome-count | |
delete-branch: true |