Get USHdir and JOBSdir from var_defns.sh

ufs-community · Oct 13, 2023 · 60aa3b3 · 60aa3b3
1 parent 2fd0569
commit 60aa3b3
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Showing 63 changed files with 191 additions and 129 deletions.
diff --git a/ush/wrappers/cheyenne/get_ics.qsub b/ush/wrappers/cheyenne/get_ics.qsub
@@ -7,12 +7,13 @@
 #PBS -N get_extrn_ics
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export nprocs='1'
 export subcyc='00'
 export ENSMEM_INDX='#mem#'
 export ICS_OR_LBCS='ICS'
 
-$USHdir/load_modules_run_task.sh "get_extrn_ics" $USHdir"/../jobs/JREGIONAL_GET_EXTRN_MDL_FILES"
+$USHdir/load_modules_run_task.sh "get_extrn_ics" $JOBSdir/JREGIONAL_GET_EXTRN_MDL_FILES
diff --git a/ush/wrappers/cheyenne/get_lbcs.qsub b/ush/wrappers/cheyenne/get_lbcs.qsub
@@ -7,12 +7,13 @@
 #PBS -N get_extrn_lbcs
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export nprocs='1'
 export subcyc='00'
 export ENSMEM_INDX='#mem#'
 export ICS_OR_LBCS='LBCS'
 
-$USHdir/load_modules_run_task.sh "get_extrn_lbcs" $USHdir"/../jobs/JREGIONAL_GET_EXTRN_MDL_FILES"
+$USHdir/load_modules_run_task.sh "get_extrn_lbcs" $JOBSdir/JREGIONAL_GET_EXTRN_MDL_FILES
diff --git a/ush/wrappers/cheyenne/make_grid.qsub b/ush/wrappers/cheyenne/make_grid.qsub
@@ -7,6 +7,7 @@
 #PBS -N make_grid
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 
-$USHdir/load_modules_run_task.sh "make_grid" $USHdir"/../jobs/JREGIONAL_MAKE_GRID"
+$USHdir/load_modules_run_task.sh "make_grid" $JOBSdir/JREGIONAL_MAKE_GRID
diff --git a/ush/wrappers/cheyenne/make_ics.qsub b/ush/wrappers/cheyenne/make_ics.qsub
@@ -7,12 +7,13 @@
 #PBS -N make_ics
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export nprocs='48'
 export subcyc='00'
 export ENSMEM_INDX='000'
 export SLASH_ENSMEM_SUBDIR='/'
 
-$USHdir/load_modules_run_task.sh "make_ics" $USHdir"/../jobs/JREGIONAL_MAKE_ICS"
+$USHdir/load_modules_run_task.sh "make_ics" $JOBSdir/JREGIONAL_MAKE_ICS
diff --git a/ush/wrappers/cheyenne/make_lbcs.qsub b/ush/wrappers/cheyenne/make_lbcs.qsub
@@ -7,7 +7,8 @@
 #PBS -N make_lbcs
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export nprocs='48'
@@ -17,4 +18,4 @@ export SLASH_ENSMEM_SUBDIR='/'
 export bcgrp='00'
 export bcgrpnum='1'
 
-$USHdir/load_modules_run_task.sh "make_lbcs" $USHdir"/../jobs/JREGIONAL_MAKE_LBCS"
+$USHdir/load_modules_run_task.sh "make_lbcs" $JOBSdir/JREGIONAL_MAKE_LBCS
diff --git a/ush/wrappers/cheyenne/make_orog.qsub b/ush/wrappers/cheyenne/make_orog.qsub
@@ -7,7 +7,8 @@
 #PBS -N make_orog
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export nprocs='24'
 
-$USHdir/load_modules_run_task.sh "make_orog" $USHdir"/../jobs/JREGIONAL_MAKE_OROG"
+$USHdir/load_modules_run_task.sh "make_orog" $JOBSdir/JREGIONAL_MAKE_OROG
diff --git a/ush/wrappers/cheyenne/make_sfc_climo.qsub b/ush/wrappers/cheyenne/make_sfc_climo.qsub
@@ -7,7 +7,8 @@
 #PBS -N make_sfc_climo
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export nprocs='48'
 
-$USHdir/load_modules_run_task.sh "make_sfc_climo" $USHdir"/../jobs/JREGIONAL_MAKE_SFC_CLIMO"
+$USHdir/load_modules_run_task.sh "make_sfc_climo" $JOBSdir/JREGIONAL_MAKE_SFC_CLIMO
diff --git a/ush/wrappers/cheyenne/run_fcst.qsub b/ush/wrappers/cheyenne/run_fcst.qsub
@@ -7,11 +7,12 @@
 #PBS -N run_fcst
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export subcyc='00'
 export ENSMEM_INDX='000'
 export SLASH_ENSMEM_SUBDIR='/'
 
-$USHdir/load_modules_run_task.sh "run_fcst" $USHdir"/../jobs/JREGIONAL_RUN_FCST"
+$USHdir/load_modules_run_task.sh "run_fcst" $JOBSdir/JREGIONAL_RUN_FCST
diff --git a/ush/wrappers/cheyenne/run_post.qsub b/ush/wrappers/cheyenne/run_post.qsub
@@ -7,7 +7,8 @@
 #PBS -N run_post
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export SLASH_ENSMEM_SUBDIR='/'
@@ -19,5 +20,5 @@ export FCST_LEN_HRS='12'
 num_fcst_hrs=${FCST_LEN_HRS}
 for (( i=0; i<=$((num_fcst_hrs)); i++ )); do
   export fhr=`printf "%03i" ${i}`
-$USHdir/load_modules_run_task.sh "run_post" $USHdir"/../jobs/JREGIONAL_RUN_POST"
+$USHdir/load_modules_run_task.sh "run_post" $JOBSdir/JREGIONAL_RUN_POST
 done
diff --git a/ush/wrappers/derecho/get_ics.qsub b/ush/wrappers/derecho/get_ics.qsub
@@ -7,12 +7,13 @@
 #PBS -N get_extrn_ics
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export nprocs='1'
 export subcyc='00'
 export ENSMEM_INDX='#mem#'
 export ICS_OR_LBCS='ICS'
 
-$USHdir/load_modules_run_task.sh "get_extrn_ics" $USHdir"/../jobs/JREGIONAL_GET_EXTRN_MDL_FILES"
+$USHdir/load_modules_run_task.sh "get_extrn_ics" $JOBSdir/JREGIONAL_GET_EXTRN_MDL_FILES
diff --git a/ush/wrappers/derecho/get_lbcs.qsub b/ush/wrappers/derecho/get_lbcs.qsub
@@ -7,12 +7,13 @@
 #PBS -N get_extrn_lbcs
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export nprocs='1'
 export subcyc='00'
 export ENSMEM_INDX='#mem#'
 export ICS_OR_LBCS='LBCS'
 
-$USHdir/load_modules_run_task.sh "get_extrn_lbcs" $USHdir"/../jobs/JREGIONAL_GET_EXTRN_MDL_FILES"
+$USHdir/load_modules_run_task.sh "get_extrn_lbcs" $JOBSdir/JREGIONAL_GET_EXTRN_MDL_FILES
diff --git a/ush/wrappers/derecho/make_grid.qsub b/ush/wrappers/derecho/make_grid.qsub
@@ -7,6 +7,7 @@
 #PBS -N make_grid
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 
-$USHdir/load_modules_run_task.sh "make_grid" $USHdir"/../jobs/JREGIONAL_MAKE_GRID"
+$USHdir/load_modules_run_task.sh "make_grid" $JOBSdir/JREGIONAL_MAKE_GRID
diff --git a/ush/wrappers/derecho/make_ics.qsub b/ush/wrappers/derecho/make_ics.qsub
@@ -7,12 +7,13 @@
 #PBS -N make_ics
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export nprocs='48'
 export subcyc='00'
 export ENSMEM_INDX='000'
 export SLASH_ENSMEM_SUBDIR='/'
 
-$USHdir/load_modules_run_task.sh "make_ics" $USHdir"/../jobs/JREGIONAL_MAKE_ICS"
+$USHdir/load_modules_run_task.sh "make_ics" $JOBSdir/JREGIONAL_MAKE_ICS
diff --git a/ush/wrappers/derecho/make_lbcs.qsub b/ush/wrappers/derecho/make_lbcs.qsub
@@ -7,7 +7,8 @@
 #PBS -N make_lbcs
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export nprocs='48'
@@ -17,4 +18,4 @@ export SLASH_ENSMEM_SUBDIR='/'
 export bcgrp='00'
 export bcgrpnum='1'
 
-$USHdir/load_modules_run_task.sh "make_lbcs" $USHdir"/../jobs/JREGIONAL_MAKE_LBCS"
+$USHdir/load_modules_run_task.sh "make_lbcs" $JOBSdir/JREGIONAL_MAKE_LBCS
diff --git a/ush/wrappers/derecho/make_orog.qsub b/ush/wrappers/derecho/make_orog.qsub
@@ -7,7 +7,8 @@
 #PBS -N make_orog
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export nprocs='24'
 
-$USHdir/load_modules_run_task.sh "make_orog" $USHdir"/../jobs/JREGIONAL_MAKE_OROG"
+$USHdir/load_modules_run_task.sh "make_orog" $JOBSdir/JREGIONAL_MAKE_OROG
diff --git a/ush/wrappers/derecho/make_sfc_climo.qsub b/ush/wrappers/derecho/make_sfc_climo.qsub
@@ -7,7 +7,8 @@
 #PBS -N make_sfc_climo
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export nprocs='48'
 
-$USHdir/load_modules_run_task.sh "make_sfc_climo" $USHdir"/../jobs/JREGIONAL_MAKE_SFC_CLIMO"
+$USHdir/load_modules_run_task.sh "make_sfc_climo" $JOBSdir/JREGIONAL_MAKE_SFC_CLIMO
diff --git a/ush/wrappers/derecho/run_fcst.qsub b/ush/wrappers/derecho/run_fcst.qsub
@@ -7,11 +7,12 @@
 #PBS -N run_fcst
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export subcyc='00'
 export ENSMEM_INDX='000'
 export SLASH_ENSMEM_SUBDIR='/'
 
-$USHdir/load_modules_run_task.sh "run_fcst" $USHdir"/../jobs/JREGIONAL_RUN_FCST"
+$USHdir/load_modules_run_task.sh "run_fcst" $JOBSdir/JREGIONAL_RUN_FCST
diff --git a/ush/wrappers/derecho/run_post.qsub b/ush/wrappers/derecho/run_post.qsub
@@ -7,7 +7,8 @@
 #PBS -N run_post
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export SLASH_ENSMEM_SUBDIR='/'
@@ -19,5 +20,5 @@ export FCST_LEN_HRS='12'
 num_fcst_hrs=${FCST_LEN_HRS}
 for (( i=0; i<=$((num_fcst_hrs)); i++ )); do
   export fhr=`printf "%03i" ${i}`
-$USHdir/load_modules_run_task.sh "run_post" $USHdir"/../jobs/JREGIONAL_RUN_POST"
+$USHdir/load_modules_run_task.sh "run_post" $JOBSdir/JREGIONAL_RUN_POST
 done
diff --git a/ush/wrappers/gaea-c5/get_ics.sbatch b/ush/wrappers/gaea-c5/get_ics.sbatch
@@ -9,12 +9,13 @@
 #SBATCH --clusters=es --partition=eslogin_c5 --export=NONE
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export nprocs='1'
 export subcyc='00'
 export ENSMEM_INDX='#mem#'
 export ICS_OR_LBCS='ICS'
 
-$USHdir/load_modules_run_task.sh "get_extrn_ics" $USHdir"/../jobs/JREGIONAL_GET_EXTRN_MDL_FILES"
+$USHdir/load_modules_run_task.sh "get_extrn_ics" $JOBSdir/JREGIONAL_GET_EXTRN_MDL_FILES
diff --git a/ush/wrappers/gaea-c5/get_lbcs.sbatch b/ush/wrappers/gaea-c5/get_lbcs.sbatch
@@ -9,12 +9,13 @@
 #SBATCH --clusters=es --partition=eslogin_c5 --export=NONE
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export nprocs='1'
 export subcyc='00'
 export ENSMEM_INDX='#mem#'
 export ICS_OR_LBCS='LBCS'
 
-$USHdir/load_modules_run_task.sh "get_extrn_lbcs" $USHdir"/../jobs/JREGIONAL_GET_EXTRN_MDL_FILES"
+$USHdir/load_modules_run_task.sh "get_extrn_lbcs" $JOBSdir/JREGIONAL_GET_EXTRN_MDL_FILES
diff --git a/ush/wrappers/gaea-c5/make_grid.sbatch b/ush/wrappers/gaea-c5/make_grid.sbatch
@@ -9,7 +9,8 @@
 #SBATCH --clusters=c5 --partition=batch --export=NONE
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export nprocs='24'
 
-$USHdir/load_modules_run_task.sh "make_grid" $USHdir"/../jobs/JREGIONAL_MAKE_GRID"
+$USHdir/load_modules_run_task.sh "make_grid" $JOBSdir/JREGIONAL_MAKE_GRID
diff --git a/ush/wrappers/gaea-c5/make_ics.sbatch b/ush/wrappers/gaea-c5/make_ics.sbatch
@@ -9,12 +9,13 @@
 #SBATCH --clusters=c5 --partition=batch --export=NONE
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export subcyc='00'
 export ENSMEM_INDX='000'
 export SLASH_ENSMEM_SUBDIR='/'
 export nprocs='48'
 
-$USHdir/load_modules_run_task.sh "make_ics" $USHdir"/../jobs/JREGIONAL_MAKE_ICS"
+$USHdir/load_modules_run_task.sh "make_ics" $JOBSdir/JREGIONAL_MAKE_ICS
diff --git a/ush/wrappers/gaea-c5/make_lbcs.sbatch b/ush/wrappers/gaea-c5/make_lbcs.sbatch
@@ -9,7 +9,8 @@
 #SBATCH --clusters=c5 --partition=batch --export=NONE
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export subcyc='00'
@@ -19,4 +20,4 @@ export nprocs='48'
 export bcgrp='00'
 export bcgrpnum='1'
 
-$USHdir/load_modules_run_task.sh "make_lbcs" $USHdir"/../jobs/JREGIONAL_MAKE_LBCS"
+$USHdir/load_modules_run_task.sh "make_lbcs" $JOBSdir/JREGIONAL_MAKE_LBCS
diff --git a/ush/wrappers/gaea-c5/make_orog.sbatch b/ush/wrappers/gaea-c5/make_orog.sbatch
@@ -9,7 +9,8 @@
 #SBATCH --clusters=c5 --partition=batch --export=NONE
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export nprocs='24'
 
-$USHdir/load_modules_run_task.sh "make_orog" $USHdir"/../jobs/JREGIONAL_MAKE_OROG"
+$USHdir/load_modules_run_task.sh "make_orog" $JOBSdir/JREGIONAL_MAKE_OROG
diff --git a/ush/wrappers/gaea-c5/make_sfc_climo.sbatch b/ush/wrappers/gaea-c5/make_sfc_climo.sbatch
@@ -9,7 +9,8 @@
 #SBATCH --clusters=c5 --partition=batch --export=NONE
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export nprocs='48'
 
-$USHdir/load_modules_run_task.sh "make_sfc_climo" $USHdir"/../jobs/JREGIONAL_MAKE_SFC_CLIMO"
+$USHdir/load_modules_run_task.sh "make_sfc_climo" $JOBSdir/JREGIONAL_MAKE_SFC_CLIMO
diff --git a/ush/wrappers/gaea-c5/run_fcst.sbatch b/ush/wrappers/gaea-c5/run_fcst.sbatch
@@ -8,11 +8,12 @@
 #SBATCH --cpus-per-task 1 --exclusive --clusters=c5 --partition=batch --export=NONE
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export subcyc='00'
 export ENSMEM_INDX='000'
 export SLASH_ENSMEM_SUBDIR='/'
 
-$USHdir/load_modules_run_task.sh "run_fcst" $USHdir"/../jobs/JREGIONAL_RUN_FCST"
+$USHdir/load_modules_run_task.sh "run_fcst" $JOBSdir/JREGIONAL_RUN_FCST
diff --git a/ush/wrappers/gaea-c5/run_post.sbatch b/ush/wrappers/gaea-c5/run_post.sbatch
@@ -9,7 +9,8 @@
 #SBATCH --clusters=c5 --partition=batch --export=NONE
 
 export GLOBAL_VAR_DEFNS_FP=$PWD'/../var_defns.sh'
-export USHdir=$PWD'/../../../ufs-srweather-app/ush'
+export USHdir=`grep USHdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
+export JOBSdir=`grep JOBSdir $GLOBAL_VAR_DEFNS_FP | cut -d\' -f2`
 export PDY='20190615'
 export cyc='18'
 export SLASH_ENSMEM_SUBDIR='/'
@@ -21,5 +22,5 @@ export FCST_LEN_HRS='12'
 num_fcst_hrs=${FCST_LEN_HRS}
 for (( i=0; i<=$((num_fcst_hrs)); i++ )); do
   export fhr=`printf "%03i" ${i}`
-$USHdir/load_modules_run_task.sh "run_post" $USHdir"/../jobs/JREGIONAL_RUN_POST"
+$USHdir/load_modules_run_task.sh "run_post" $JOBSdir/JREGIONAL_RUN_POST
 done