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Experiment Code for MultiPath

Instructions

  1. Download the data by running python3 download.py in the data/ directory (Data courtesy of MINERVA),
  2. For the full set of data used here, including the biomedical data, download this file and uncompress here,
  3. Run the experiments by picking any of the run_*.sh scripts with ./run_*.sh or bash run_*.sh.

Notes

  • You can get a nicely formatted explanation of all of the options by running python3 main.py --help in the root directory, or read through the get_config() method in main.py,
  • To see tensorboards, go to outputs/tensorboards and run tensorboard --logdir=FILE_NAME.tb --host=CUSTOM_HOST --port=CUSTOM_PORT. Port forwarding can be done with ssh -L BROWSER_PORT:HOST_NAME:SERVER_PORT -N USER_NAME@SERVER,