Simple BioPython toy to filter contigs based on size. Used highly-Pythonic "generator" design - ideal for adaptation to stream processing.
python filter_contigs.py 500 /path/to/my/assembly.fasta > /path/to/filtered/output.fasta
-
Notifications
You must be signed in to change notification settings - Fork 3
Simple BioPython toy to filter contigs based on size. Used highly-Pythonic "generator" design - ideal for adaptation to stream processing.
License
tinybio/filter_contigs
Folders and files
| Name | Name | Last commit message | Last commit date | |
|---|---|---|---|---|
Repository files navigation
About
Simple BioPython toy to filter contigs based on size. Used highly-Pythonic "generator" design - ideal for adaptation to stream processing.
Resources
License
Stars
Watchers
Forks
Releases
No releases published
Packages 0
No packages published