GitHub - theHubert/spisop: SpiSOP is free software for most commonly used basic sleep EEG analyses in one easy tool, and facilitates the fast replication of results on large data quanta, as well as enables others to share and communicate the exact methods.

theHubert / spisop Public

forked from Frederik-D-Weber/spisop

Notifications You must be signed in to change notification settings
Fork 0
Star 0

SpiSOP is free software for most commonly used basic sleep EEG analyses in one easy tool, and facilitates the fast replication of results on large data quanta, as well as enables others to share and communicate the exact methods.

www.spisop.org

View license

0 stars 8 forks Branches Tags Activity

Star

Notifications

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 55 Commits
2016		2016
dummy		dummy
external_code		external_code
fieldtrip_fw		fieldtrip_fw
input		input
mainfunctions		mainfunctions
output		output
standard		standard
subfunctions		subfunctions
utility/convert_data/OpenBCIv3/convert_SD_fileSD_to_ascii		utility/convert_data/OpenBCIv3/convert_SD_fileSD_to_ascii
LICENSE		LICENSE
README		README
Z3Score_license.txt		Z3Score_license.txt
Z3score_setup_readme.txt		Z3score_setup_readme.txt
append_edf_files.m		append_edf_files.m
append_edf_files_ft2016.m		append_edf_files_ft2016.m
compile.m		compile.m
spisop.m		spisop.m
spisop_icon.ico		spisop_icon.ico
spisop_init.m		spisop_init.m
spisop_init_helper.m		spisop_init_helper.m
spisop_init_single.m		spisop_init_single.m

Repository files navigation

SpiSOP (abrev. for Spindles Slow Oscillation and Power-spectral-density)
is an open source tool supporting detection and reporting of spindle or slow oscillation events,
their co-occurance or respective matching non-events and power (density) of specific spectra
or frequency bands in pre-scored (sleep stages) EEG and MEG data
as well as simple automatic EMG artifact detection.
Most detection methods and annotations reported in sleep EEG research are covered
and thus can be replicated by minor adaptions in the standard parameters.
SpiSOP was designed to process large data quanta at once and multiple datasets in parallel.
Analysis is according to wished channels, their various combinations,
specified dynamic sleep stages, various detection thresholds and further parameters.
Frequency peaks in the power band of slow oscillations, spindles or any other band of interest
are automatically determined and visually confirmed or adapted by user.
SpiSOP also contains a data browser to sleep (re)score
and view sleep EEG data and previously detected events,
as well as aids in scoring and detection decisions.
It comes as a standalone commandline tool for Windows, Linux and Mac,
or can be integrated as toolbox in Matlab. But the functionality does not stop there...

The SpiSOP and FieldTrip software is free but copyrighted software, distributed
under the terms of the GNU General Public Licence as published by
the Free Software Foundation (either version 2, or at your option
any later version). See the file COPYING.txt for more details.

The functions in the SpiSOP toolbox are copyrighted by their respective authors:
Frederik D. Weber, Germany, Tübingen, [email protected]

The SpiSOP software is a toolbox, i.e. a library with functions.
The release includes functions from other toolboxes that are covered
under their respective licenses. See /fieldtrip_fw and /fieldtrip_fw/external for details.

For a documentation of the toolbox see the www.spisop.org.

Thanks to the implementers and developers and funding organisations and persons of FieldTrip and the code used therein, it's a wonderful toolbox.
Thanks to the developers and researches of the algorithms and methods for spindle and slow oscillation detection.
Thanks to the people that helped in the process.