TVB-2113: fixed activate scripts #1696
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| name: Test PG | |
| on: [push] | |
| jobs: | |
| build: | |
| name: Frw-Tests (3.11 PG-SQL) | |
| runs-on: ubuntu-latest | |
| services: | |
| postgres: | |
| image: postgres:11 | |
| env: | |
| POSTGRES_USER: postgres | |
| POSTGRES_PASSWORD: postgres | |
| POSTGRES_DB: tvb-test | |
| ports: | |
| - 5432:5432 | |
| options: --health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 # Shallow clones should be disabled for a better relevancy of analysis | |
| - name: set up Python | |
| uses: actions/setup-python@v4 | |
| id: setPy | |
| with: | |
| python-version: "3.11" | |
| - name: put ~/.local/bin on $PATH | |
| run: echo "PATH=$HOME/.local/bin:$PATH" >> $GITHUB_ENV | |
| # - name: cache ~/.local for pip deps | |
| # id: cache-local | |
| # uses: actions/cache@v3 | |
| # with: | |
| # path: ~/.local | |
| # key: pip--${{ hashFiles('tvb_build/docker/requirements_group') }} | |
| - name: install tools and dependencies | |
| # if: steps.cache-local.outputs.cache-hit != 'true' | |
| run: | | |
| sudo apt-get update | |
| sudo apt install libbz2-dev libhdf5-serial-dev liblzo2-dev | |
| python3 -m pip install --upgrade setuptools==59.8.0 pip wheel | |
| python3 -m pip install cryptography | |
| python3 -m pip install lockfile | |
| python3 -m pip install syncrypto | |
| python3 -m pip install -r tvb_build/docker/requirements_group | |
| pip3 install --user --no-build-isolation tvb-gdist | |
| - name: setup tvb | |
| run: cd tvb_build && bash install_full_tvb.sh | |
| - name: cache data | |
| id: cache-data | |
| uses: actions/cache@v3 | |
| with: | |
| path: demo_data | |
| key: tvb-data-10128131 | |
| - name: download data | |
| if: steps.cache-data.outputs.cache-hit != 'true' | |
| run: | | |
| wget -q https://zenodo.org/record/10128131/files/tvb_data.zip?download=1 -O tvb_data.zip | |
| mkdir demo_data | |
| unzip tvb_data.zip -d demo_data | |
| rm tvb_data.zip | |
| - name: setup data | |
| run: cd demo_data && python3 setup.py develop | |
| - name: run framework tests | |
| run: | | |
| cd tvb_framework | |
| pytest tvb/tests/framework --profile=TEST_POSTGRES_PROFILE | |