Skip to content
/ cesium Public

Database of Oscillatory and random chemical network models written in Antimony format.

Notifications You must be signed in to change notification settings

sys-bio/cesium

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

75 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Cesium

Cesium a public database containing approximately 2000 oscillating networks with between three and nine species created using a customized evolution algorithm, an optimization process based on the iterative improvement of candidate models. The source code for the algorithm that generated these evolved models can be found here: https://github.com/sys-bio/evolution. Also within this database are approximately 8000 randomly generated models with between one and ten species. All models are written in Antimony, a chemical network modeling language.

More information about Antimony:

Our paper on chemical network oscillator generation: an be found here:

Website

Current website, under construction: https://sys-bio.github.io/cesium/

The former website can be found at https://cesiumdb.herokuapp.com/

Credits

About

Database of Oscillatory and random chemical network models written in Antimony format.

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published