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@statgen

Center for Statistical Genetics

The Center for Statistical Genetics at the University of Michigan School of Public Health

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  1. pheweb pheweb Public

    A tool to build a website to browse hundreds or thousands of GWAS.

    Python 154 65

  2. locuszoom locuszoom Public

    A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

    JavaScript 149 29

  3. demuxlet demuxlet Public

    Genetic multiplexing of barcoded single cell RNA-seq

    C++ 115 25

  4. SLURM-examples SLURM-examples Public

    Python 86 28

  5. bamUtil bamUtil Public

    C++ 85 29

  6. locuszoom-standalone locuszoom-standalone Public

    Create regional association plots from GWAS or meta-analysis

    Python 57 20

Repositories

Showing 10 of 108 repositories
  • EPID731_2024 Public
    statgen/EPID731_2024’s past year of commit activity
    Python 0 0 0 0 Updated Jul 23, 2024
  • METAL Public

    Meta-analysis of genomewide association scans

    statgen/METAL’s past year of commit activity
    C++ 39 12 23 1 Updated Jul 18, 2024
  • pheweb Public

    A tool to build a website to browse hundreds or thousands of GWAS.

    statgen/pheweb’s past year of commit activity
    Python 154 MIT 65 36 1 Updated Jul 12, 2024
  • encore Public

    Encore Analysis Server

    statgen/encore’s past year of commit activity
    Python 13 AGPL-3.0 6 0 5 Updated Jul 10, 2024
  • vuptool Public

    Tool for detecting and handling genomic variant under methylation probes

    statgen/vuptool’s past year of commit activity
    C++ 0 MPL-2.0 0 0 0 Updated Jul 7, 2024
  • cloudgene Public Forked from genepi/cloudgene

    A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.

    statgen/cloudgene’s past year of commit activity
    Java 0 AGPL-3.0 19 0 0 Updated Jul 5, 2024
  • demuxlet Public

    Genetic multiplexing of barcoded single cell RNA-seq

    statgen/demuxlet’s past year of commit activity
    C++ 115 Apache-2.0 25 70 3 Updated Jul 1, 2024
  • savvy Public

    Interface to various variant calling formats.

    statgen/savvy’s past year of commit activity
    C++ 26 MPL-2.0 5 8 0 Updated Jun 15, 2024
  • bravo_vue Public

    BRAVO's Vue JS based UI.

    statgen/bravo_vue’s past year of commit activity
    Vue 0 0 11 8 Updated May 23, 2024
  • terraform-aws-imputation-server Public

    A set of Terraform Modules for deploying an imputation server on AWS

    statgen/terraform-aws-imputation-server’s past year of commit activity
    HCL 0 Apache-2.0 2 0 0 Updated Apr 26, 2024
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