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Pull requests: spinalcordtoolbox/spinalcordtoolbox

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Pull requests list

[WIP] Better track changes to SCT's outputs by exporting a summary of all output files
#4759 opened Dec 23, 2024 by joshuacwnewton • Draft
Allow adding -qc-seg to crop the QC generated by sct_deepseg feature category: new functionality sct_deepseg context: Global entry point for all deep learning segmentation methods
#4754 opened Dec 16, 2024 by plbenveniste Loading…
5 of 8 tasks
1
25
Interpolate mid-sagittal slices using two slices enhancement category: improves performance/results of an existing feature sct_analyze_lesion context:
#4702 opened Nov 20, 2024 by valosekj Loading…
7 of 8 tasks
7.0
1
39
Add the bavaria-quebec nnUNet model for MS lesion and cord segmentation to sct_deepseg model suite feature category: new functionality sct_deepseg context: Global entry point for all deep learning segmentation methods
#4692 opened Nov 11, 2024 by naga-karthik • Draft
3 of 4 tasks
7.0
1
1
Use argparse subparsers for sct_deepseg refactoring category: improves code structure without affecting user-facing functionality sct_deepseg context: Global entry point for all deep learning segmentation methods
#4685 opened Nov 7, 2024 by joshuacwnewton • Draft 7.0
1
@joshuacwnewton
Rootlets-informed registration to the template feature category: new functionality sct_register_to_template context:
#4647 opened Oct 9, 2024 by sandrinebedard Loading…
6 of 8 tasks
7.0
1
@sandrinebedard
58
Update get_centerline to ensure that pixel coordinates are reoriented prior to converting to physical coordinates bug category: fixes an error in the code sct_get_centerline context:
#4622 opened Sep 4, 2024 by joshuacwnewton • Draft 7.0
1
@joshuacwnewton
16
Improve moco for interleaved data enhancement category: improves performance/results of an existing feature sct_dmri_moco context:
#3172 opened Jan 14, 2021 by valosekj • Draft
2 tasks
1
1
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