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@sib-swiss

SIB Swiss Institute of Bioinformatics

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  1. training-collection training-collection Public

    Collection of bioinformatics training materials

    Python 988 184

  2. single-cell-training single-cell-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    R 78 36

  3. intermediate-python-training intermediate-python-training Public

    Jupyter Notebook 63 27

  4. first-steps-with-python-training first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    Jupyter Notebook 54 17

  5. first-steps-with-R-training first-steps-with-R-training Public

    repository of the 2-day course "First steps with R in Life Sciences" from SIB-training

    R 42 12

  6. intro-machine-learning-training intro-machine-learning-training Public

    Jupyter Notebook 38 15

Repositories

Showing 10 of 123 repositories
  • training-collection Public

    Collection of bioinformatics training materials

    sib-swiss/training-collection’s past year of commit activity
    Python 988 184 1 0 Updated Dec 22, 2024
  • sib-swiss/single-cell-python-training’s past year of commit activity
    HTML 1 CC-BY-4.0 0 0 0 Updated Dec 22, 2024
  • sib-swiss/spatial-transcriptomics-training’s past year of commit activity
    R 2 CC-BY-4.0 1 1 0 Updated Dec 22, 2024
  • sib-swiss/cancer-variants-training’s past year of commit activity
    Lua 2 CC-BY-4.0 2 0 0 Updated Dec 22, 2024
  • sparql-llm Public

    🦜✨ Chat system and reusable components to improve LLMs capabilities when generating SPARQL queries

    sib-swiss/sparql-llm’s past year of commit activity
    Jupyter Notebook 11 MIT 1 1 0 Updated Dec 19, 2024
  • kgsteward Public

    Knwowledge Graph Steward - Command line tool to help manage RDF store (GraphDB)

    sib-swiss/kgsteward’s past year of commit activity
    Python 5 GPL-3.0 2 0 0 Updated Dec 19, 2024
  • glittr Public

    A web application for finding and comparing bioinformatics training materials on GitHub and GitLab

    sib-swiss/glittr’s past year of commit activity
    PHP 37 MIT 2 3 0 Updated Dec 19, 2024
  • AWS-docker Public

    Set of commands to deploy docker containers on an AWS instance

    sib-swiss/AWS-docker’s past year of commit activity
    Shell 5 MIT 1 1 0 Updated Dec 19, 2024
  • sparql-examples Public

    A set of SPARQL examples that are used in different SIB resources

    sib-swiss/sparql-examples’s past year of commit activity
    HTML 10 10 5 (1 issue needs help) 2 Updated Dec 18, 2024
  • sparql-examples-utils Public Forked from sib-swiss/sparql-examples

    A tool to maintain and test your SPARQL examples

    sib-swiss/sparql-examples-utils’s past year of commit activity
    Java 4 10 14 2 Updated Dec 18, 2024

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