refactor: Update codespell configuration and dependencies

.pre-commit-config.yaml

@@ -14,7 +14,7 @@ repos:
       - id: end-of-file-fixer
       - id: trailing-whitespace
   - repo: https://github.com/charliermarsh/ruff-pre-commit
-    rev: v0.5.0
+    rev: v0.5.1
     hooks:
       - id: ruff
         args:
@@ -24,6 +24,12 @@ repos:
     rev: v8.18.4
     hooks:
       - id: gitleaks
+  - repo: https://github.com/codespell-project/codespell
+    rev: v2.3.0
+    hooks:
+      - id: codespell
+        additional_dependencies:
+          - tomli
 ci:
-  autofix_commit_msg: 🎨 [pre-commit.ci] Auto format from pre-commit.com hooks
-  autoupdate_commit_msg: ⬆ [pre-commit.ci] pre-commit autoupdate
+  autofix_commit_msg: "chore: [pre-commit.ci] Auto format from pre-commit.com hooks"
+  autoupdate_commit_msg: "chore: [pre-commit.ci] pre-commit autoupdate"

pyproject.toml

@@ -5,32 +5,32 @@ description = "A python library for efficient processing of spectral images."
 authors = [{ name = "janezlapajne", email = "[email protected]" }]
 
 classifiers = [
-	"Intended Audience :: Information Technology",
-	"Operating System :: OS Independent",
-	"Programming Language :: Python :: 3",
-	"Programming Language :: Python",
-	"Topic :: Internet",
-	"Topic :: Software Development :: Libraries :: Python Modules",
-	"Topic :: Software Development :: Libraries",
-	"Topic :: Software Development",
-	"Typing :: Typed",
-	"Intended Audience :: Developers",
-	"License :: OSI Approved :: MIT License",
-	"Programming Language :: Python :: 3 :: Only",
-	"Programming Language :: Python :: 3.10",
-	"Programming Language :: Python :: 3.11",
-	"Programming Language :: Python :: 3.12",
+    "Intended Audience :: Information Technology",
+    "Operating System :: OS Independent",
+    "Programming Language :: Python :: 3",
+    "Programming Language :: Python",
+    "Topic :: Internet",
+    "Topic :: Software Development :: Libraries :: Python Modules",
+    "Topic :: Software Development :: Libraries",
+    "Topic :: Software Development",
+    "Typing :: Typed",
+    "Intended Audience :: Developers",
+    "License :: OSI Approved :: MIT License",
+    "Programming Language :: Python :: 3 :: Only",
+    "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
 ]
 
 dependencies = [
-	"pandas>=2.2.2",
-	"opencv-python>=4.10.0.82",
-	"spectral>=0.23.1",
-	"scikit-learn>=1.5.0",
-	"pydantic>=2.7.3",
-	"rich>=13.7.1",
-	"scikit-image>=0.24.0",
-	"matplotlib>=3.9.0",
+    "pandas>=2.2.2",
+    "opencv-python>=4.10.0.82",
+    "spectral>=0.23.1",
+    "scikit-learn>=1.5.0",
+    "pydantic>=2.7.3",
+    "rich>=13.7.1",
+    "scikit-image>=0.24.0",
+    "matplotlib>=3.9.0",
 ]
 requires-python = ">=3.10"
 readme = "README.md"
@@ -53,14 +53,14 @@ source-includes = ["tests/", "scripts/", "docs/"]
 
 [tool.pdm.dev-dependencies]
 lint = [
-	"black>=24.4.2",
-	"flake8>=7.0.0",
-	"ruff>=0.4.8",
-	"mypy>=1.10.1",
-	"pandas-stubs>=2.2.2.240603",
+    "black>=24.4.2",
+    "flake8>=7.0.0",
+    "ruff>=0.4.8",
+    "mypy>=1.10.1",
+    "pandas-stubs>=2.2.2.240603",
 ]
-dev = ["pre-commit>=3.7.1"]
-test = ["pytest>=8.2.2", "pytest-cov>=5.0.0"]
+dev = ["pre-commit>=3.7.1", "tomli>=2.0.1", "codespell>=2.3.0"]
+test = ["pytest>=8.2.2", "pytest-cov>=5.0.0", "pytest-xdist>=3.6.1"]
 docs = ["mkdocs>=1.6.0"]
 
 [tool.pytest.ini_options]
@@ -87,3 +87,9 @@ lint.ignore = ["F811"]
 [tool.ruff.lint.pyupgrade]
 # Preserve types, even if a file imports `from __future__ import annotations`.
 keep-runtime-typing = true
+
+[tool.codespell]
+ignore-words-list = "janezlapajne"
+skip = 'dist/*, ./_old, docs, htmlcov, LICENCE, *.lock, requirements.txt, *.toml, CHANGELOG.md, *.cff'
+count = true
+check-hidden = false