Format for AAAS Science Journal #373
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| 1. Need a help to figure out how to create a pandoc template for the author's section | ||
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There was a problem hiding this comment. It seems they don't have a clever system for authors. It is written as is in the template % Place the author information here. Please hand-code the contact
% information and notecalls; do *not* use \footnote commands. Let the
% author contact information appear immediately below the author names
% as shown. We would also prefer that you don't change the type-size
% settings shown here.
\author
{John Smith,$^{1\ast}$ Jane Doe,$^{1}$ Joe Scientist$^{2}$\\
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\normalsize{$^{1}$Department of Chemistry, University of Wherever,}\\
\normalsize{An Unknown Address, Wherever, ST 00000, USA}\\
\normalsize{$^{2}$Another Unknown Address, Palookaville, ST 99999, USA}\\
\\
\normalsize{$^\ast$To whom correspondence should be addressed; E-mail: [email protected].}
}You just need to replace this by some variable to set in the YAML header (could be several) and a for loop maybe in the template. Maybe something like authors:
- John Smith,$^{1\ast}$
- Jane Doe,$^{1}$
- Joe Scientist$^{2}$
addresses:
- $^{1}$Department of Chemistry, University of Wherever,
- An Unknown Address, Wherever, ST 00000, USA
- $^{2}$Another Unknown Address, Palookaville, ST 99999, USA
corresponding_author: |
$^\ast$To whom correspondence should be addressed; E-mail: [email protected].would lead to this or something else. Just try something that works. Have you look at other templates to have ideas ? |
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| 2. Is there a way to get Pandoc to render all images at the end? | ||
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There was a problem hiding this comment. What do you mean by that exactly ? Not sure to understand. It would not be Pandoc but knitr or rmarkdown. Maybe this format would require a more advanced pre process and post process as other formats in the rticles package. If so, this would be done on the R side. If you explain more precisely I can guide you. There was a problem hiding this comment. The journal requirements for figures are as follows -
So, my thought was to let the author set a variable to either "Draft" or "Final" in the YAML header and then compile the document as needed without having to change the primary rmarkdown file. There was a problem hiding this comment. This is a good thought. I hope this will be possible to do so. You may try. I think it will need to be in the R function that would set or unset a value of a knitr option. It could also be a variable set in the setup chunk to use in chunks with figures. This variable would modify the value of the chunk option accordingly. I let you try what you think is better. But Pandoc itself won't be able to do that (unless maybe using a Lua filter, but it seems too much) |
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| 3. Problem is that they want figures rendered for the initial draft / peer review, but no figures included for the final version - | ||
| - potential solution - get pandoc variable "figures:true" to decide if images should be included in the PDF or not | ||
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There was a problem hiding this comment. This would need to be controlled by knitr options I think. For example What should the output document look like ? No figure inside the document but what in replacement ? |
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| 4. In which format does science want references? is there a custom csl file - There only appears to be Science.bst file? | ||
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\bibliographystyle{Science}is the one that should set the style. |
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Just curious why this extension needs to be unset ?