Output proper job files for SLURM engine jobs.

Thanks to Marf Hafner for pointing out the issue.
roryk · Oct 2, 2017 · a333a7e · a333a7e
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diff --git a/HISTORY.md b/HISTORY.md
@@ -1,3 +1,7 @@
+## 0.5.7 (in progress)
+- Fix for SLURM engine output files not having the proper job IDs.
+- Additional fixes for python3 support.
+
 ## 0.5.6 (2 Aug 2017)
 
 - Additional work to better resolve local IP addresses, first trying to pick

diff --git a/cluster_helper/cluster.py b/cluster_helper/cluster.py
@@ -453,8 +453,8 @@ class BcbioSLURMEngineSetLauncher(SLURMLauncher, launcher.BatchClusterAppMixin):
     default_template = traitlets.Unicode("""#!/bin/sh
 #SBATCH -p {queue}
 #SBATCH -J {tag}-e[1-{n}]
-#SBATCH -o bcbio-ipengine.out.%%j
-#SBATCH -e bcbio-ipengine.err.%%j
+#SBATCH -o bcbio-ipengine.out.%A_%a
+#SBATCH -e bcbio-ipengine.err.%A_%a
 #SBATCH --cpus-per-task={cores}
 #SBATCH --array=1-{n}
 #SBATCH -t {timelimit}