Releases: qbicsoftware/etl-scripts
Releases · qbicsoftware/etl-scripts
Version 1.14.0
prepare release (#112) * add error handling via email for attachment upload (#111) * update readme for attachment upload
Patch release 1.13.1
- Fixes minor issue with simultaneous registration of fastq and vcf files
- Fixes debug prints causing errors due to concatenation
Release 1.13.0
- Enables registration of new version of nanopore data including extra basecalling folder
- Fixes mistake in readme for imaging data registration
- Makes imaging data registration error handling compatible with old python/jython versions
Minor release 1.12.0
Logs duplicate MTB dataset registration but does not cause manual intervention anymore.
Chocolate Macaron
Prepare release 1.11.0 (#96) * change ms conversion server * remove some log files dependent on origin lab (#95) Co-authored-by: Tobias Koch <[email protected]> * handle data without unclassified reads * Update CL (#92) Co-authored-by: Tobias Koch <[email protected]> Co-authored-by: Sven F <[email protected]>
The dark knight returns
- Provides new ETL for MTB project data that are not supposed to be stored in QUK17 (#89)
- Allow multiple sequencing lanes for MTB data
The dark ETL rises
Spring Roll
- Add example Java dropbox
From 1.7.0:
- Provides fully tested functionality to register generic imaging data, with OMERO server support (v5.4.10).
- Uses an omero-importer-cli (with Bio-formats) for image file registration into an OMERO server instance
- Uses an initial version of the openBIS-OMERO metadata model
Blue Moon
- Fix for workflow result registration: fetch sample by identifier instead of search service
- Retry sample tracking updates twice and log failures that occur
Yellow Autumn
- New maintenance task: update missing checksum once, after dss starts.
- Fix for nanopore registration: rename folders for pooling case
- Fix for experiment update: force identifier into a string to support v3 API objects