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Enable NanoporeParser to validate and parse pod5 based nanopore structures #126

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Steffengreiner
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@Steffengreiner Steffengreiner commented Nov 2, 2023

What was changed

In the newer versions nanopore switched from generating fast5 files to a pod5 format. This major change necessitates a change in how we validate and parse the datastructures provided by us from the partner labs to ensure backwards compability.

@Steffengreiner Steffengreiner marked this pull request as ready for review November 3, 2023 15:49
@Steffengreiner Steffengreiner requested a review from a team as a code owner November 3, 2023 15:49
@Steffengreiner Steffengreiner merged commit 8fa9117 into development Nov 3, 2023
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@Steffengreiner Steffengreiner deleted the feature/dm-1003-nanopore-dorado-basecaller-pod5-parser-support branch November 3, 2023 16:15
@Steffengreiner Steffengreiner mentioned this pull request Nov 3, 2023
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2 participants