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preprocessing_pipeline_mne

This repository serves as a resource to perform preprocessing steps using the mne-python library.

You will learn how to..

  • ..load and convert EEG and Marker streams from xdf files.
  • ..handle multiple runs and blocks for multiple subjects.
  • ..apply filters, re-reference EEG, clean data (statistically and visually).
  • ..further use the pre-processed data.

Installation

  1. Clone the repository
  2. pip install -r requirements.txt
  3. pip install "mne>=1.0" matplotlib mne-qt-browser
  4. Download the data from here

How to use

  • Run jupyter-lab or jupyter notebook

  • Open 01_preprocessing_pipeline.ipynb and modify the DATA_PATH to your local path.

  • Have fun playing around and investigating the data.

Additional information

  • This code was implemented and tested with python 3.10

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