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  1. PyDESeq2 PyDESeq2 Public

    A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

    Python 550 59

  2. FLamby FLamby Public

    Cross-silo Federated Learning playground in Python. Discover 7 real-world federated datasets to test your new FL strategies and try to beat the leaderboard.

    Python 194 24

  3. HistoSSLscaling HistoSSLscaling Public

    Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., MedRxiv (2023). We publicly release Phikon 🚀

    Jupyter Notebook 138 11

  4. HE2RNA_code HE2RNA_code Public archive

    Train a model to predict gene expression from histology slides.

    Python 88 39

  5. GrAIdient GrAIdient Public

    GrAIdient is a deep learning framework that aims at challenging the way we train and run models in computer vision.

    Swift 69 2

  6. DSB2017 DSB2017 Public archive

    Data Science Bowl 2017 : Lung Cancer Detection

    Python 43 15

Repositories

Showing 10 of 41 repositories
  • PyDESeq2 Public

    A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

    owkin/PyDESeq2’s past year of commit activity
    Python 550 MIT 59 32 5 Updated Jul 22, 2024
  • docker-dependency-updater Public

    Checks system dependencies and update them if required

    owkin/docker-dependency-updater’s past year of commit activity
    TypeScript 1 Apache-2.0 0 0 5 Updated Jul 22, 2024
  • GrAIdient Public

    GrAIdient is a deep learning framework that aims at challenging the way we train and run models in computer vision.

    owkin/GrAIdient’s past year of commit activity
    Swift 69 MIT 2 0 0 Updated Jul 19, 2024
  • owkin/drl-evaluation’s past year of commit activity
    0 0 0 0 Updated Jul 18, 2024
  • openslide-rs Public Forked from AzHicham/openslide-rs

    Rust bindings for Openslide

    owkin/openslide-rs’s past year of commit activity
    Rust 0 Apache-2.0 2 0 0 Updated Jul 18, 2024
  • fedeca Public

    Code repository associated with the FedECA article

    owkin/fedeca’s past year of commit activity
    Python 7 2 8 (3 issues need help) 0 Updated Jul 2, 2024
  • hte Public
    owkin/hte’s past year of commit activity
    Python 3 Apache-2.0 1 0 0 Updated Jun 27, 2024
  • OAH-Clone-Test Public

    Test Clone Logs

    owkin/OAH-Clone-Test’s past year of commit activity
    0 0 0 0 Updated Jun 19, 2024
  • deepdeconv-fork Public Forked from owkin/deepdeconv

    Deep probabilistic analysis of single-cell omics data

    owkin/deepdeconv-fork’s past year of commit activity
    Python 1 BSD-3-Clause 346 0 2 Updated Jun 19, 2024
  • FLamby Public

    Cross-silo Federated Learning playground in Python. Discover 7 real-world federated datasets to test your new FL strategies and try to beat the leaderboard.

    owkin/FLamby’s past year of commit activity
    Python 194 MIT 24 24 (4 issues need help) 0 Updated Jun 19, 2024

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