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    14 repositories

    • the-turing-way

      Public
      Host repository for The Turing Way: a how to guide for reproducible data science
      TeX
      •
      Other
      •654•0•0•1•Updated Aug 19, 2024Aug 19, 2024

    • TTW-Bookdash-GH-workshop

      Public
      This is for TTW bookDash GH Workshop
      Creative Commons Zero v1.0 Universal
      •10•0•0•0•Updated Nov 7, 2023Nov 7, 2023

    • Ensembl-genome-browser-and-REST-API

      Public
      the Ensembl genome browser and REST API to retrieve genome annotation data
      Creative Commons Attribution 4.0 International
      •0•1•0•0•Updated Nov 3, 2023Nov 3, 2023

    • workshop-tidyverse

      Public
      Workshop: Using R/tidyverse to analyze & visualize processed genomics data!
      HTML
      •
      BSD 3-Clause "New" or "Revised" License
      •19•2•0•0•Updated Mar 11, 2023Mar 11, 2023

    • iscb2022_tidytranscriptomics

      Public
      Introduction to Tidy Transcriptomics
      scrna-seqtranscriptomics
      R
      •
      Other
      •3•2•0•0•Updated Dec 12, 2022Dec 12, 2022

    • bioada

      Public
      Data Science for Biomarkers Discovery
      bioinformaticstutorialrstats
      R
      •0•3•0•0•Updated Nov 1, 2022Nov 1, 2022

    • Elements-of-Style-Reproducible-Workflow-Creation-Maintenance-Tutorial

      Public
      Jupyter Notebook
      •
      MIT License
      •9•19•0•0•Updated Jul 3, 2022Jul 3, 2022

    • bioinfo-targets

      Public
      Workshop on modular, reproducible bioinformatics workflows with the {targets} R package
      Creative Commons Attribution 4.0 International
      •1•2•0•0•Updated Jul 1, 2022Jul 1, 2022

    • integrating_knowledge_data

      Public
      Integrating gene expression and biological knowledge for drug discovery and repurposing
      gene-expressiondrug-discoverydrug-repurposingdata-integrationcausal-net
      HTML
      •
      Creative Commons Attribution 4.0 International
      •2•2•0•0•Updated May 10, 2022May 10, 2022

    • Discussion

      Public
      This will include planning and discussion of the ISCB Academy
      Creative Commons Attribution 4.0 International
      •0•0•0•0•Updated May 4, 2022May 4, 2022

    • keywords

      Public
      Documentation for implementing bioschemas in the ISCB Academy Website
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Feb 14, 2022Feb 14, 2022

    • Template

      Public template
      This is a Template for all ISCB Tutorials
      Creative Commons Attribution 4.0 International
      •0•1•0•0•Updated Jan 13, 2022Jan 13, 2022

    • ISCB-Academy-Tutorial-Community-Modelling

      Public
      It provides a brief overview of the key modelling paradigms that have been used to study microbiomes
      modellingmicrobiomespython
      Jupyter Notebook
      •
      Creative Commons Attribution 4.0 International
      •4•3•0•0•Updated Dec 2, 2021Dec 2, 2021

    • rnaseq

      Public
      RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control
      Nextflow
      •
      MIT License
      •708•0•0•0•Updated Sep 15, 2019Sep 15, 2019