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    • .github

      Public
      A special GitHub repository for setting the organization profile and default community health files.
      BSD 3-Clause "New" or "Revised" License
      1000Updated Dec 10, 2024Dec 10, 2024
    • State cancer profiles scraper
      Python
      MIT License
      1000Updated Dec 10, 2024Dec 10, 2024
    • A list of tools, packages, workflows, resources, and other software developed at or in collaboration with DBMI
      JavaScript
      8210Updated Dec 2, 2024Dec 2, 2024
    • Website for the software engineering team (SET)
      HTML
      BSD 3-Clause "New" or "Revised" License
      316120Updated Nov 25, 2024Nov 25, 2024
    • Various data analysis performed using Hetionet, a hetnet of biomedical knowledge.
      Jupyter Notebook
      BSD 3-Clause "New" or "Revised" License
      1000Updated Nov 20, 2024Nov 20, 2024
    • A repository for presentations from the DBMI Software Engineering Team (SET)
      Jupyter Notebook
      BSD 3-Clause "New" or "Revised" License
      1210Updated Nov 1, 2024Nov 1, 2024
    • Fun visualization that can be used as a background
      HTML
      MIT License
      0100Updated Oct 8, 2024Oct 8, 2024
    • A project to help demonstrate Python software testing.
      Python
      BSD 3-Clause "New" or "Revised" License
      0000Updated Oct 1, 2024Oct 1, 2024
    • Request support from the Software Engineering Team
      0070Updated Sep 10, 2024Sep 10, 2024
    • @CU-DBMI seminar committee material
      BSD 3-Clause "New" or "Revised" License
      1000Updated Aug 16, 2024Aug 16, 2024
    • Python
      2400Updated Aug 3, 2024Aug 3, 2024
    • rootstock

      Public
      TEST for Manubot AI Editor
      HTML
      Other
      181001Updated Jul 17, 2024Jul 17, 2024
    • Crawls PMC for publications by specified authors
      Jupyter Notebook
      BSD 3-Clause "New" or "Revised" License
      2000Updated Jun 13, 2024Jun 13, 2024
    • An open source repository for shared Diversity, Equity, and Inclusion (DEI) educational resources.
      BSD 3-Clause "New" or "Revised" License
      0021Updated May 21, 2024May 21, 2024
    • Enabling RTX-KG2 data access through various means.
      Jupyter Notebook
      BSD 3-Clause "New" or "Revised" License
      1020Updated May 17, 2024May 17, 2024
    • Template for creating Cloud Storage bucket on Google Cloud.
      CUE
      BSD 3-Clause "New" or "Revised" License
      10100Updated Apr 11, 2024Apr 11, 2024
    • This is an engine that converts data of one structure to another, based on a configuration file which describes how. There is an accompanying syntax to make writing mappings easier and more robust.
      Java
      Apache License 2.0
      66100Updated Mar 24, 2024Mar 24, 2024
    • redirects

      Public template
      JavaScript
      BSD 3-Clause "New" or "Revised" License
      0400Updated Mar 14, 2024Mar 14, 2024
    • A test repo to see why workflows submitted from forked PRs weren't running, please ignore
      1011Updated Mar 7, 2024Mar 7, 2024
    • Data analysis on DBMI Software Engineering Team efforts.
      Jupyter Notebook
      BSD 3-Clause "New" or "Revised" License
      1010Updated Feb 22, 2024Feb 22, 2024
    • Demonstrating Python memory allocator reference counting and debug.
      Python
      BSD 3-Clause "New" or "Revised" License
      1030Updated Feb 22, 2024Feb 22, 2024
    • A demonstrational repository showing how Python Poetry dynamic versioning can be used to distribute Docker container images on Docker Hub for Python packages.
      Dockerfile
      BSD 3-Clause "New" or "Revised" License
      1000Updated Jan 2, 2024Jan 2, 2024
    • RTX-KG2

      Public
      Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
      Python
      MIT License
      8000Updated Dec 7, 2023Dec 7, 2023
    • A special GitHub repository for setting the CCPM-IO organization profile and default community health files.
      2000Updated Nov 13, 2023Nov 13, 2023
    • Python
      1100Updated Sep 28, 2023Sep 28, 2023
    • Demonstrating the use of Python on Alpine, a High Performance Compute (HPC) cluster hosted by the University of Colorado Boulder's Research Computing.
      Shell
      Apache License 2.0
      1010Updated Sep 15, 2023Sep 15, 2023
    • redirects-website

      Public template
      Test out "chatroom" redirection link below:
      JavaScript
      BSD 3-Clause "New" or "Revised" License
      0100Updated Sep 8, 2023Sep 8, 2023
    • Exploring R and Python environment management.
      Apache License 2.0
      1020Updated Apr 6, 2023Apr 6, 2023
    • This repository helps demonstrate various Github Actions capabilities.
      Python
      Apache License 2.0
      1000Updated Mar 15, 2023Mar 15, 2023
    • Perform routine toggl work report generation or calculations
      Python
      Apache License 2.0
      0000Updated Jan 19, 2023Jan 19, 2023