GitHub - orenavram/IgomeProfiling: A computational pipeline for high resolution profiling of the IgOme

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A computational pipeline for high resolution profiling of the IgOme

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Name		Name	Last commit message	Last commit date
Latest commit History 150 Commits
.idea		.idea
PSSM_score_Peptide		PSSM_score_Peptide
UnitePSSMs		UnitePSSMs
auxiliaries		auxiliaries
mock_data		mock_data
model_fitting		model_fitting
motif_inference		motif_inference
post_analysis		post_analysis
reads_filtration		reads_filtration
IgOmeProfiling_pipeline.py		IgOmeProfiling_pipeline.py
README.txt		README.txt
global_params.py		global_params.py

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The main script is called IgOmeProfiling_pipeline.py. In order to run it write in the command line the following and you will see the manual of the application:
python IgOmeProfiling_pipeline.py -h

You can find some test data at mock_data folder.