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CellBase v3.1.0 Stable Release
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@imedina imedina released this 21 Apr 00:32
· 4252 commits to develop since this release
v3.1.0
41cb13a

New stable CellBase v3.1.0. Many changes have been made and many tests and bugs need to be fixed. Major changes include:

  • New cellbase-app CLI using JCommander, this allows to download, build and load automatically CellBase
  • New Variant Annotator developed, it has been tested and benchmarked against Ensembl VEP
  • Swagger, README and documentation has been improved
  • New data sources and functionality added. Human GRCh38 supported
  • New data installation at University of Cambridge at bioinfo.hpc.cam.ac.uk/cellbase
  • License changed to Apache License 2.0
  • Performance improvements all across CellBase, many bugs fixed and code clean ups

Some issues developed:

https://github.com/opencb/cellbase/issues?q=milestone%3Av3.1.0

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