Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Include API-KEY for CADD scores #699

Open
wants to merge 2 commits into
base: develop
Choose a base branch
from
Open

Include API-KEY for CADD scores #699

wants to merge 2 commits into from

Commits on Jul 18, 2024

  1. lib: update variant manager and variant annotator to support CADD as …

    …licensed data, #TASK-6573, #TASK-6441
    
    On branch TASK-6441
    Changes to be committed:
    	modified:   cellbase-app/src/main/java/org/opencb/cellbase/app/cli/admin/executors/ExportCommandExecutor.java
    	modified:   cellbase-core/src/main/java/org/opencb/cellbase/core/api/key/ApiKeyLicensedDataUtils.java
    	modified:   cellbase-lib/src/main/java/org/opencb/cellbase/lib/managers/VariantManager.java
    	modified:   cellbase-lib/src/main/java/org/opencb/cellbase/lib/variant/annotation/VariantAnnotationCalculator.java
    jtarraga committed Jul 18, 2024
    Configuration menu
    Copy the full SHA
    e56914c View commit details
    Browse the repository at this point in the history
  2. tests: add JUnit tests for CADD as licensed data, #TASK-6573, #TASK-6441

    On branch TASK-6441
    Changes to be committed:
    	modified:   cellbase-lib/src/test/java/org/opencb/cellbase/lib/GenericMongoDBAdaptorTest.java
    	modified:   cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/VariantAnnotationCalculatorTest.java
    	modified:   cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/VariantMongoDBAdaptorTest.java
    jtarraga committed Jul 18, 2024
    Configuration menu
    Copy the full SHA
    7f4cb9a View commit details
    Browse the repository at this point in the history