cicd: shell script #TASK-5061 #280
juanfeSanahujatask.yml
on: push
build
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Build Java app
2m 40s
deploy-docker
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Push Docker image
Annotations
23 errors
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CellBaseNormalizerSequenceAdaptorTest.testGenomicSequenceQueryStartOutOfLeftBound:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/CellBaseNormalizerSequenceAdaptorTest.java#L34
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604508, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "DYJeUpKRFDJI1x5WMXzfCpf/OqM=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604508, "i": 1}}}
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CellBaseNormalizerSequenceAdaptorTest.testGenomicSequenceChromosomeNotPresent:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/CellBaseNormalizerSequenceAdaptorTest.java#L34
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604508, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "DYJeUpKRFDJI1x5WMXzfCpf/OqM=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604508, "i": 1}}}
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CellBaseNormalizerSequenceAdaptorTest.testGenomicSequenceQueryEndOutOfRightBound:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/CellBaseNormalizerSequenceAdaptorTest.java#L34
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604508, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "DYJeUpKRFDJI1x5WMXzfCpf/OqM=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604508, "i": 1}}}
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CellBaseNormalizerSequenceAdaptorTest.testGenomicSequenceQueryStartEndOutOfRightBound:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/CellBaseNormalizerSequenceAdaptorTest.java#L34
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604508, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "DYJeUpKRFDJI1x5WMXzfCpf/OqM=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604508, "i": 1}}}
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ClinicalMongoDBAdaptorTest.parseQueryTest:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/ClinicalMongoDBAdaptorTest.java#L64
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604498, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "hyCXmIzBzzsUyNRF2XbV9gZwA1A=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604498, "i": 1}}}
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GeneMongoDBAdaptorTest.testQuery:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/GeneMongoDBAdaptorTest.java#L70
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604508, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "DYJeUpKRFDJI1x5WMXzfCpf/OqM=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604508, "i": 1}}}
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GeneMongoDBAdaptorTest.testQueryId:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/GeneMongoDBAdaptorTest.java#L51
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604518, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "tiW0xmNzULrmVXobzOYIJOeimv8=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604518, "i": 1}}}
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GeneMongoDBAdaptorTest.testConstraints:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/GeneMongoDBAdaptorTest.java#L124
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604518, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "tiW0xmNzULrmVXobzOYIJOeimv8=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604518, "i": 1}}}
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GenomeMongoDBAdaptorTest.org.opencb.cellbase.lib.impl.core.GenomeMongoDBAdaptorTest:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/GenomeMongoDBAdaptorTest.java#L50
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604508, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "DYJeUpKRFDJI1x5WMXzfCpf/OqM=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604508, "i": 1}}}
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PharmacogenomicsMongoDBAdaptorTest.testQuery:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/PharmacogenomicsMongoDBAdaptorTest.java#L73
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604518, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "tiW0xmNzULrmVXobzOYIJOeimv8=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604518, "i": 1}}}
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PharmacogenomicsMongoDBAdaptorTest.testQueryName:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/PharmacogenomicsMongoDBAdaptorTest.java#L55
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604518, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "tiW0xmNzULrmVXobzOYIJOeimv8=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604518, "i": 1}}}
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ProteinMongoDBAdaptorTest.testQuery:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/ProteinMongoDBAdaptorTest.java#L45
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604518, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "tiW0xmNzULrmVXobzOYIJOeimv8=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604518, "i": 1}}}
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TranscriptMongoDBAdaptorTest.testQuery:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/TranscriptMongoDBAdaptorTest.java#L44
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604518, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "tiW0xmNzULrmVXobzOYIJOeimv8=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604518, "i": 1}}}
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VariantAnnotationCalculatorTest.org.opencb.cellbase.lib.impl.core.VariantAnnotationCalculatorTest:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/VariantAnnotationCalculatorTest.java#L54
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604508, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "DYJeUpKRFDJI1x5WMXzfCpf/OqM=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604508, "i": 1}}}
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VariantMongoDBAdaptorTest.testGet:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/VariantMongoDBAdaptorTest.java#L61
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604498, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "hyCXmIzBzzsUyNRF2XbV9gZwA1A=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604498, "i": 1}}}
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VariantMongoDBAdaptorTest.testGetFunctionalScoreVariant:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/VariantMongoDBAdaptorTest.java#L61
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604498, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "hyCXmIzBzzsUyNRF2XbV9gZwA1A=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604498, "i": 1}}}
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VariantMongoDBAdaptorTest.getPhasedPopulationFrequencyByVariant:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/VariantMongoDBAdaptorTest.java#L61
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604498, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "hyCXmIzBzzsUyNRF2XbV9gZwA1A=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604498, "i": 1}}}
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XRefMongoDBAdaptorTest.queryTest:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/impl/core/XRefMongoDBAdaptorTest.java#L43
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604508, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "DYJeUpKRFDJI1x5WMXzfCpf/OqM=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604508, "i": 1}}}
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IndexManagerTest.testIndexes:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/indexer/IndexManagerTest.java#L46
Command failed with error 13 (Unauthorized): 'command listIndexes requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command listIndexes requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604518, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "tiW0xmNzULrmVXobzOYIJOeimv8=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604518, "i": 1}}}
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VariantManagerTest.org.opencb.cellbase.lib.variant.VariantManagerTest:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/variant/VariantManagerTest.java#L49
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604498, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "hyCXmIzBzzsUyNRF2XbV9gZwA1A=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604498, "i": 1}}}
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HgvsCalculatorTest.org.opencb.cellbase.lib.variant.hgvs.HgvsCalculatorTest:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/variant/hgvs/HgvsCalculatorTest.java#L42
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604498, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "hyCXmIzBzzsUyNRF2XbV9gZwA1A=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604498, "i": 1}}}
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HgvsTranscriptCalculatorTest.org.opencb.cellbase.lib.variant.hgvs.HgvsTranscriptCalculatorTest:
cellbase-lib/src/test/java/org/opencb/cellbase/lib/variant/hgvs/HgvsTranscriptCalculatorTest.java#L60
Command failed with error 13 (Unauthorized): 'command find requires authentication' on server localhost:27017. The full response is {"ok": 0.0, "errmsg": "command find requires authentication", "code": 13, "codeName": "Unauthorized", "$clusterTime": {"clusterTime": {"$timestamp": {"t": 1696604498, "i": 1}}, "signature": {"hash": {"$binary": {"base64": "hyCXmIzBzzsUyNRF2XbV9gZwA1A=", "subType": "00"}}, "keyId": 7242658313941286920}}, "operationTime": {"$timestamp": {"t": 1696604498, "i": 1}}}
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test / Test and push Sonar analysis
There were 22 failed tests
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Artifacts
Produced during runtime
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build-folder
Expired
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232 MB |
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