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napari 0.5 support #389

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napari 0.5 support #389

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b4995da
Add support for both new and old napari syntax
jni Jul 1, 2024
55e3328
fix version check
jni Jul 4, 2024
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10 changes: 9 additions & 1 deletion ome_zarr/reader.py
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Original file line number Diff line number Diff line change
Expand Up @@ -3,6 +3,7 @@
import logging
import math
from abc import ABC
from importlib.metadata import PackageNotFoundError, version
from typing import Any, Dict, Iterator, List, Optional, Type, Union, cast, overload

import dask.array as da
Expand Down Expand Up @@ -253,12 +254,19 @@ def __init__(self, node: Node) -> None:
del properties[label_val]["label-value"]

# TODO: a metadata transform should be provided by specific impls.
try:
napari_version = tuple(
map(int, list(version("napari").split(".")[:2]))
) # major and minor versions as int
except PackageNotFoundError:
napari_version = (0, 5) # default to 0.5+ if not installed
colormap_key = "colormap" if napari_version >= (0, 5) else "color"
name = self.zarr.basename()
node.metadata.update(
{
"visible": node.visible,
"name": name,
"color": colors,
colormap_key: colors,
"metadata": {"image": self.lookup("image", {}), "path": name},
}
)
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