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bioformats2raw.layout #112

Merged
merged 32 commits into from
Sep 28, 2022
Merged

bioformats2raw.layout #112

merged 32 commits into from
Sep 28, 2022

Commits on Apr 7, 2022

  1. First draft of bioformats2raw.layout

    @joshmoore
    joshmoore committed Apr 7, 2022
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Commits on Apr 8, 2022

  1. Add layout example

    @joshmoore
    joshmoore committed Apr 8, 2022
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Commits on Apr 20, 2022

  1. Improve wording of "SHOULD parse multiple images", thanks to Ilan 

    see: ome#104 (comment)
    @joshmoore
    joshmoore committed Apr 20, 2022
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  2. Clarify contents of METADATA.ome.xml, thanks to Melissa

    @joshmoore
    joshmoore committed Apr 20, 2022
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Commits on Apr 21, 2022

  1. Add schema & test for bf2raw metadata

    @joshmoore
    joshmoore committed Apr 21, 2022
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  2. Add missing schema file

    @joshmoore
    joshmoore committed Apr 21, 2022
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Commits on May 3, 2022

  1. Merge 'origin/main' into bf2raw

    @joshmoore
    joshmoore committed May 3, 2022
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Commits on May 11, 2022

  1. Add applicable versions statement

    @joshmoore
    joshmoore committed May 11, 2022
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Commits on May 30, 2022

  1. Update text with suggestions

    @joshmoore
    joshmoore committed May 30, 2022
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  2. Merge 'origin/main' into bf2raw

    @joshmoore
    joshmoore committed May 30, 2022
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  3. Add bf2raw examples config

    @joshmoore
    joshmoore committed May 30, 2022
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  4. Add test to find missing configs

    @joshmoore
    joshmoore committed May 30, 2022
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  5. Split subitems to pass linting

    @joshmoore
    joshmoore committed May 30, 2022
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  6. Add graphical layout representation

    @joshmoore
    joshmoore committed May 30, 2022
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  7. Fix missing whitespace

    @joshmoore
    joshmoore committed May 30, 2022
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Commits on Jul 18, 2022

  1. Add "series" attribute in "OME" group under bioformats2raw.layout 

    Documents the current state of glencoesoftware/bioformats2raw#157
    @melissalinkert @joshmoore
    melissalinkert authored and joshmoore committed Jul 18, 2022
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  2. Update the MUST/SHOULD semantics

    @joshmoore
    joshmoore committed Jul 18, 2022
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Commits on Sep 14, 2022

  1. Fix doubly indented bullets

    @joshmoore
    joshmoore committed Sep 14, 2022
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  2. Make minimum spec a link

    @joshmoore
    joshmoore committed Sep 14, 2022
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  3. Add no-toc sections

    @joshmoore
    joshmoore committed Sep 14, 2022
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  4. Re-arrange and add more text

    @joshmoore
    joshmoore committed Sep 14, 2022
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Commits on Sep 15, 2022

  1. Make changes based on feedback from Will

    @joshmoore
    joshmoore committed Sep 15, 2022
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  2. Add bf2raw plate example

    @joshmoore
    joshmoore committed Sep 15, 2022
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  3. Add schema for ome series

    @joshmoore
    joshmoore committed Sep 15, 2022
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Commits on Sep 19, 2022

  1. Apply suggestions from code review 

    Co-authored-by: Melissa Linkert <[email protected]>
Co-authored-by: Sébastien Besson <[email protected]>
    @joshmoore @melissalinkert @sbesson
    3 people authored Sep 19, 2022
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Commits on Sep 22, 2022

  1. Apply to v0.4 only

    @joshmoore
    joshmoore committed Sep 22, 2022
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  2. Re-iterate plate precedence without OME/METADATA.ome.xml

    @joshmoore
    joshmoore committed Sep 22, 2022
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  3. Backport latest/bf2raw to 0.4

    @joshmoore
    joshmoore committed Sep 22, 2022
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  4. Re-word the 'series' section

    @joshmoore
    joshmoore committed Sep 22, 2022
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  5. Make plate/series link a "SHOULD"

    @joshmoore
    joshmoore authored Sep 22, 2022
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Commits on Sep 26, 2022

  1. Add 'transitional' to 'omero' spec

    @joshmoore
    joshmoore committed Sep 26, 2022
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  2. Add 0.4.1 changelog

    @joshmoore
    joshmoore committed Sep 26, 2022
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