Merge pull request #120 from sbesson/plate_specification

Add JSON schemas for plate and well specification

0.4/examples/plate_strict/.config.json

@@ -0,0 +1,3 @@
+{
+    "schema": "schemas/strict_plate.schema"
+}

0.4/examples/plate_strict/plate_2wells.json

@@ -0,0 +1,91 @@
+{
+    "plate": {
+        "acquisitions": [
+            {
+                "id": 1,
+                "maximumfieldcount": 1,
+                "name": "single acquisition",
+                "starttime": 1343731272000
+            }
+        ],
+        "columns": [
+            {
+                "name": "1"
+            },
+            {
+                "name": "2"
+            },
+            {
+                "name": "3"
+            },
+            {
+                "name": "4"
+            },
+            {
+                "name": "5"
+            },
+            {
+                "name": "6"
+            },
+            {
+                "name": "7"
+            },
+            {
+                "name": "8"
+            },
+            {
+                "name": "9"
+            },
+            {
+                "name": "10"
+            },
+            {
+                "name": "11"
+            },
+            {
+                "name": "12"
+            }
+        ],
+        "field_count": 1,
+        "name": "sparse test",
+        "rows": [
+            {
+                "name": "A"
+            },
+            {
+                "name": "B"
+            },
+            {
+                "name": "C"
+            },
+            {
+                "name": "D"
+            },
+            {
+                "name": "E"
+            },
+            {
+                "name": "F"
+            },
+            {
+                "name": "G"
+            },
+            {
+                "name": "H"
+            }
+        ],
+        "version": "0.4",
+        "wells": [
+            {
+                "path": "C/5",
+                "rowIndex": 2,
+                "columnIndex": 4
+            },
+            {
+                "path": "D/7",
+                "rowIndex": 3,
+                "columnIndex": 6
+            }
+        ]
+    }
+}

0.4/examples/plate_strict/plate_6wells.json

@@ -0,0 +1,72 @@
+{
+    "plate": {
+        "acquisitions": [
+            {
+                "id": 1,
+                "maximumfieldcount": 2,
+                "name": "Meas_01(2012-07-31_10-41-12)",
+                "starttime": 1343731272000
+            },
+            {
+                "id": 2,
+                "maximumfieldcount": 2,
+                "name": "Meas_02(201207-31_11-56-41)",
+                "starttime": 1343735801000
+            }
+        ],
+        "columns": [
+            {
+                "name": "1"
+            },
+            {
+                "name": "2"
+            },
+            {
+                "name": "3"
+            }
+        ],
+        "field_count": 4,
+        "name": "test",
+        "rows": [
+            {
+                "name": "A"
+            },
+            {
+                "name": "B"
+            }
+        ],
+        "version": "0.4",
+        "wells": [
+            {
+                "path": "A/1",
+                "rowIndex": 0,
+                "columnIndex": 0
+            },
+            {
+                "path": "A/2",
+                "rowIndex": 0,
+                "columnIndex": 1
+            },
+            {
+                "path": "A/3",
+                "rowIndex": 0,
+                "columnIndex": 2
+            },
+            {
+                "path": "B/1",
+                "rowIndex": 1,
+                "columnIndex": 0
+            },
+            {
+                "path": "B/2",
+                "rowIndex": 1,
+                "columnIndex": 1
+            },
+            {
+                "path": "B/3",
+                "rowIndex": 1,
+                "columnIndex": 2
+            }
+        ]
+    }
+}

0.4/examples/well_strict/.config.json

@@ -0,0 +1,3 @@
+{
+    "schema": "schemas/strict_well.schema"
+}

0.4/examples/well_strict/well_2fields.json

@@ -0,0 +1,15 @@
+{
+    "well": {
+        "images": [
+            {
+                "acquisition": 0,
+                "path": "0"
+            },
+            {
+                "acquisition": 3,
+                "path": "1"
+            }
+        ],
+        "version": "0.4"
+    }
+}

0.4/examples/well_strict/well_4fields.json

@@ -0,0 +1,23 @@
+{
+    "well": {
+        "images": [
+            {
+                "acquisition": 1,
+                "path": "0"
+            },
+            {
+                "acquisition": 1,
+                "path": "1"
+            },
+            {
+                "acquisition": 2,
+                "path": "2"
+            },
+            {
+                "acquisition": 2,
+                "path": "3"
+            }
+        ],
+        "version": "0.4"
+    }
+}