chore: Bump deeptools/bamcoverage

nf-core · Dec 23, 2024 · 9fe1db2 · 9fe1db2
1 parent 7d33c65
commit 9fe1db2
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Showing 19 changed files with 314 additions and 77 deletions.
diff --git a/conf/modules.config b/conf/modules.config
@@ -336,12 +336,12 @@ process {
 
     withName: DEEPTOOLS_BAMCOVERAGE_PLUS {
         ext.args = "--filterRNAstrand forward"
-        ext.prefix = { "${meta.id}.plus.bigWig" }
+        ext.prefix = { "${meta.id}.plus" }
     }
 
     withName: DEEPTOOLS_BAMCOVERAGE_MINUS {
         ext.args = "--filterRNAstrand reverse"
-        ext.prefix = { "${meta.id}.minus.bigWig" }
+        ext.prefix = { "${meta.id}.minus" }
     }
 
     withName:DREG_PREP {

diff --git a/modules.json b/modules.json
@@ -84,7 +84,7 @@
                     },
                     "deeptools/bamcoverage": {
                         "branch": "master",
-                        "git_sha": "3f5420aa22e00bd030a2556dfdffc9e164ec0ec5",
+                        "git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
                         "installed_by": ["modules"]
                     },
                     "dragmap/align": {

diff --git a/modules/nf-core/deeptools/bamcoverage/environment.yml b/modules/nf-core/deeptools/bamcoverage/environment.yml
diff --git a/modules/nf-core/deeptools/bamcoverage/main.nf b/modules/nf-core/deeptools/bamcoverage/main.nf
diff --git a/modules/nf-core/deeptools/bamcoverage/meta.yml b/modules/nf-core/deeptools/bamcoverage/meta.yml
diff --git a/modules/nf-core/deeptools/bamcoverage/tests/main.nf.test b/modules/nf-core/deeptools/bamcoverage/tests/main.nf.test