Endless Tofu

What's Changed

• post-release version bump by @sateeshperi in #450
• Fix/fasta gunzip & bismark align cache by @sateeshperi in #457
• Feat/fastq align dedup bismark by @sateeshperi in #465
• Fasta index bismark bwameth by @sateeshperi in #468
• Conf modules configs by @sateeshperi in #469
• run_preseq param + skip preseq/lcextrap by default by @sateeshperi in #470
• run_qualimap param and skip qualimap/bamqc by default by @sateeshperi in #471
• Removed ambiguity in the multilane sample information by @bounlu in #452
• Disable gunzip publish by @sateeshperi in #474
• CI: add gpu tag test job by @sateeshperi in #478
• Fasta align dedup bwameth by @sateeshperi in #475
• Checking if shards > 0 are present before firing tests by @GallVp in #484
• Updated metro maps. by @ewels in #479
• Test replicates by @sateeshperi in #486
• Doc updates by @sateeshperi in #489
• Template update for nf-core/tools v3.1.0 by @sateeshperi in #490
• Important! Template update for nf-core/tools v3.1.0 by @nf-core-bot in #488
• 2.8.0 bump-version by @sateeshperi in #491
• Cytosine report test by @sateeshperi in #493
• First attempt at fact-checking chatGPT by @FelixKrueger in #495
• add bs-seq-primer doc by @sateeshperi in #494
• bump ver to 3.0.0 semver by @sateeshperi in #496
• Dev -> Master 3.0.0 by @sateeshperi in #492

New Contributors

• @bounlu made their first contribution in #452
• @GallVp made their first contribution in #484

Full Changelog: 2.7.1...v3.0.0