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Workflow outputs (first preview) #27

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@bentsherman bentsherman requested a review from pditommaso April 12, 2024 14:56
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pditommaso and others added 3 commits May 6, 2024 12:40
Signed-off-by: Paolo Di Tommaso <[email protected]>
Signed-off-by: Dr Marco Claudio De La Pierre <[email protected]>
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Signed-off-by: Paolo Di Tommaso <[email protected]>
Signed-off-by: Paolo Di Tommaso <[email protected]>
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Signed-off-by: Ben Sherman <[email protected]>
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let's rebase this changes over workflow-output-2nd branch, and keep workflow-output-dsl for review 1

@bentsherman bentsherman changed the title Replace publishDir with workflow output definition Workflow outputs (first preview) Nov 4, 2024
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Keeping this PR as a record of the first iteration, namely:

  • publish outputs from process by default
  • separate output targets by tool (fastqc, quant, multiqc, etc)

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