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update run_phenomix to run multiple CTD levels #49

update run_phenomix to run multiple CTD levels

update run_phenomix to run multiple CTD levels #49

Triggered via push September 26, 2024 17:21
Status Failure
Total duration 33m 16s
Artifacts

rworkflows.yml

on: push
Matrix: rworkflows
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18 errors and 15 warnings
windows-latest (auto)
--- re-building 'MSTExplorer.Rmd' using rmarkdown
windows-latest (auto)
processing vignette 'MSTExplorer.Rmd' failed with diagnostics:
windows-latest (auto)
Vignette re-building failed.
windows-latest (auto)
Build process failed
windows-latest (auto)
Process completed with exit code 1.
macOS-latest (auto)
--- re-building ‘docker.Rmd’ using rmarkdown
macOS-latest (auto)
processing vignette 'MSTExplorer.Rmd' failed with diagnostics:
macOS-latest (auto)
Vignette re-building failed.
macOS-latest (auto)
Build process failed
macOS-latest (auto)
Process completed with exit code 1.
ubuntu-latest (auto)
Input required and not supplied: path
ubuntu-latest (auto)
Process completed with exit code 1.
ubuntu-latest (auto)
[Workflow Telemetry] Unable to finish stat collector
ubuntu-latest (auto)
[Workflow Telemetry] Error
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
ubuntu-latest (auto)
[Workflow Telemetry] Unable to report stat collector result
ubuntu-latest (auto)
[Workflow Telemetry] Error
ubuntu-latest (auto)
Error: connect ECONNREFUSED 127.0.0.1:7777
windows-latest (auto)
replacing previous import 'KGExplorer::to_graph' by 'scKirby::to_graph' when loading 'phenomix'
windows-latest (auto)
replacing previous import 'KGExplorer::to_graph' by 'scKirby::to_graph' when loading 'phenomix'
windows-latest (auto)
replacing previous import 'KGExplorer::to_graph' by 'scKirby::to_graph' when loading 'phenomix'
windows-latest (auto)
No files were found with the provided path: check. No artifacts will be uploaded.
windows-latest (auto)
The following actions use a deprecated Node.js version and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
macOS-latest (auto)
harfbuzz 9.0.0 is already installed and up-to-date. To reinstall 9.0.0, run: brew reinstall harfbuzz
macOS-latest (auto)
fribidi 1.0.15 is already installed and up-to-date. To reinstall 1.0.15, run: brew reinstall fribidi
macOS-latest (auto)
macOS's Gatekeeper has been disabled for this Cask
macOS-latest (auto)
replacing previous import ‘KGExplorer::to_graph’ by ‘scKirby::to_graph’ when loading ‘phenomix’
macOS-latest (auto)
replacing previous import ‘KGExplorer::to_graph’ by ‘scKirby::to_graph’ when loading ‘phenomix’
macOS-latest (auto)
replacing previous import ‘KGExplorer::to_graph’ by ‘scKirby::to_graph’ when loading ‘phenomix’
macOS-latest (auto)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (auto)
The following actions use a deprecated Node.js version and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ubuntu-latest (auto)
No files were found with the provided path: check. No artifacts will be uploaded.
ubuntu-latest (auto)
The following actions use a deprecated Node.js version and will be forced to run on node20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/