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Fix MAGMA executable links #12

Fix MAGMA executable links

Fix MAGMA executable links #12

Triggered via push May 17, 2024 16:58
Status Failure
Total duration 23m 50s
Artifacts 3

rworkflows.yml

on: push
Matrix: rworkflows
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8 errors and 22 warnings
macOS-latest (auto)
No such keg: /opt/homebrew/Cellar/r
macOS-latest (auto)
Test failures
macOS-latest (auto)
R CMD check found ERRORs
macOS-latest (auto)
Process completed with exit code 1.
windows-latest (auto)
R CMD check found ERRORs
windows-latest (auto)
Test failures
windows-latest (auto)
Process completed with exit code 1.
ubuntu-latest (auto)
Process completed with exit code 1.
macOS-latest (auto)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macOS-latest (auto)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-latest (auto)
harfbuzz 8.4.0 is already installed and up-to-date. To reinstall 8.4.0, run: brew reinstall harfbuzz
macOS-latest (auto)
macOS's Gatekeeper has been disabled for this Cask
macOS-latest (auto)
dependency ‘BiocStyle’ is not available
macOS-latest (auto)
No annotLevel 1 celltypes reach significance @ q-value<=0.05 returning NULL.
macOS-latest (auto)
No annotLevel 1 celltypes reach significance @ q-value<=0.05 returning NULL.
macOS-latest (auto)
no MAGMA executable found.
macOS-latest (auto)
no MAGMA executable found.
macOS-latest (auto)
no MAGMA executable found.
windows-latest (auto)
dependency 'BiocStyle' is not available
windows-latest (auto)
no MAGMA executable found.
windows-latest (auto)
no MAGMA executable found.
windows-latest (auto)
no MAGMA executable found.
windows-latest (auto)
no MAGMA executable found.
windows-latest (auto)
no MAGMA executable found.
windows-latest (auto)
no MAGMA executable found.
windows-latest (auto)
no MAGMA executable found.
windows-latest (auto)
no MAGMA executable found.
windows-latest (auto)
no MAGMA executable found.
ubuntu-latest (auto)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: runforesight/workflow-telemetry-action@v1, actions/cache@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "Linux-biocversion-devel-r-auto-results", "macOS-biocversion-release-r-auto-results", "Windows-biocversion-release-r-auto-results". Please update your workflow to use v4 of the artifact actions. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/

Artifacts

Produced during runtime
Name Size
Linux-biocversion-devel-r-auto-results Expired
7.47 MB
Windows-biocversion-release-r-auto-results Expired
7.23 MB
macOS-biocversion-release-r-auto-results Expired
7.58 MB