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Fundamentals of Bioinformatics

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Name		Name	Last commit message	Last commit date
Latest commit History 95 Commits
run		run
scripts		scripts
.gitignore		.gitignore
README		README
TODO.markdown		TODO.markdown

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How to run BLAST with a ROC plot:

cd run/
../scripts/main.py -h

With SCOP for example:

cd run/
../scripts/main.py --scop proteins.txt


To run other things:

cd run/
python ../scripts/BLAST.py
python ../scripts/GOTerms.py
python ../scripts/PfamData.py
python ../scripts/SCOP.py