Inputdata used to rely on svn hooks to github

Updated some scripts to use git sparse checkout instead, also scripts exit when
error occurs instead of happily continuing beyond errors

.github/workflows/run_test_suite.yml

@@ -18,6 +18,7 @@ jobs:
           sudo apt install make gfortran netcdf-bin libnetcdf-dev libnetcdff-dev openmpi-bin libopenmpi-dev
       - name: Run Test Suite
         run: |
+          ./reg_tests/common/setup_inputdata.sh
           cd bld
           ./cvmix_setup gfortran $(dirname $(dirname $(which nc-config)))
           cd ../CVMix_tools

reg_tests/common/check_inputdata.sh

@@ -1,17 +1,24 @@
-#!/bin/bash
+#!/bin/bash -e
 
 check_inputdata () {
 
   DATA_REPO=https://github.com/CVMix/CVMix-data/trunk/
 
+  cd ${INPUTDATA_DIR}
+  ALL_FOUND=TRUE
   for file in "$@"; do
     echo "Looking for $file..."
-    if [ -e ${INPUTDATA_DIR}/$file ]; then
+    if [ -e $file ]; then
       echo "Found!"
     else
-      svn export ${DATA_REPO}/$file ${INPUTDATA_DIR}/$file
-      echo "... Downloaded!"
+      echo "${file}" >> .git/info/sparse-checkout
+      ALL_FOUND=FALSE
+      echo "... added to sparse-checkout!"
     fi
   done
 
-}
+  if [ "${ALL_FOUND}" == "FALSE" ]; then
+    git checkout master
+  fi
+
+}

reg_tests/common/setup_inputdata.sh

@@ -0,0 +1,9 @@
+#!/bin/bash -e
+# Since github dropped support for svn hooks, now need to set up
+# a sparse checkout to get inputdata.
+# NOTE: this script must be run from ${CVMIX_ROOT}!
+
+cd inputdata
+git init
+git config core.sparseCheckout true
+git remote add -f CVMix-data https://github.com/CVMix/CVMix-data.git

reg_tests/tidal-Simmons/Simmons-test.sh

@@ -1,4 +1,4 @@
-#!/bin/bash
+#!/bin/bash -e
 
 # (1) Load required routines
 . ../common/environ.sh