Various utilities for the RNAPlot program included into ViennaRNA suite.
Right now it can convert an input file from Multistrand, DrTransformer or Kinwalker to a file readable by RNAPlot.
usage: rnaplot_utils.py [-h] [-i1 MULTISTRAND_IN_FILE]
[-i2 DRTRANSFORMER_IN_FILE] [-i3 KINWALKER_IN_FILE]
RNAplot utils
optional arguments:
-h, --help show this help message and exit
-i1 MULTISTRAND_IN_FILE, --input-multistrand MULTISTRAND_IN_FILE
Multistrand input file
-i2 DRTRANSFORMER_IN_FILE, --input-drtransformer DRTRANSFORMER_IN_FILE
Drtransformer input file
-i3 KINWALKER_IN_FILE, --input-kinwalker KINWALKER_IN_FILE
Kinwalker input file
The output files will have the same name of the corresponding input file with the extension changed to .vienna )in the case of an input file without extension, it will be added).
If a file named as the future output file already exists, it will be overwritten.
NOTE: every input file will have its own corresponding output file, for example python3 rnaplot_utils.py -i1 file1 -i2 file2 will generate two files file1.vienna and file2.vienna.