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@metaspace2020

METASPACE

Scientific project on metabolite annotation of big data from imaging mass spectrometry

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  1. metaspace metaspace Public

    Cloud engine and platform for metabolite annotation for imaging mass spectrometry

    TypeScript 44 9

Repositories

Showing 10 of 21 repositories
  • metaspace Public

    Cloud engine and platform for metabolite annotation for imaging mass spectrometry

    metaspace2020/metaspace’s past year of commit activity
    TypeScript 44 Apache-2.0 9 89 8 Updated Jul 4, 2024
  • metaspace-converter Public

    Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData

    metaspace2020/metaspace-converter’s past year of commit activity
    Python 8 Apache-2.0 0 3 0 Updated Mar 16, 2024
  • Lithops-METASPACE Public

    Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline

    metaspace2020/Lithops-METASPACE’s past year of commit activity
    Jupyter Notebook 12 4 3 2 Updated Jul 6, 2023
  • offsample Public

    Project to develop methods to recognize off-sample mass spectrometry images

    metaspace2020/offsample’s past year of commit activity
    Jupyter Notebook 6 0 0 0 Updated Oct 8, 2020
  • coloc Public

    Methods for measuring co-localization of ion images

    metaspace2020/coloc’s past year of commit activity
    Vue 7 Apache-2.0 2 2 0 Updated Oct 7, 2020
  • pixel-annot-export Public archive

    Metaspace pixel annotation export snapshots

    metaspace2020/pixel-annot-export’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Apr 14, 2019
  • sm-engine Public archive

    Engine for metabolite annotation for imaging mass spectrometry

    metaspace2020/sm-engine’s past year of commit activity
    Python 7 Apache-2.0 5 0 0 Updated Jul 30, 2018
  • sm-engine-ansible Public archive

    Setting up cloud infrastructure for the engine using Ansible

    metaspace2020/sm-engine-ansible’s past year of commit activity
    Python 2 Apache-2.0 6 0 1 Updated Jun 29, 2018
  • sm-molecular-db Public archive

    Unified REST API for molecular database data

    metaspace2020/sm-molecular-db’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Jun 28, 2018
  • metadata Public archive

    Metadata for imaging mass spectrometry

    metaspace2020/metadata’s past year of commit activity
    1 Apache-2.0 2 0 0 Updated Jun 28, 2018
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