Pycromanager T and Z sweep acquisition script #730
Workflow file for this run
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| # Modified from cookiecutter-napari-plugin | |
| # This workflows will upload a Python Package using Twine when a release is created | |
| # For more information see: https://help.github.com/en/actions/language-and-framework-guides/using-python-with-github-actions#publishing-to-package-registries | |
| name: test-and-deploy | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - "*" | |
| pull_request: | |
| branches: | |
| - "*" | |
| workflow_dispatch: | |
| jobs: | |
| test: | |
| name: ${{ matrix.platform }} py${{ matrix.python-version }} | |
| runs-on: ${{ matrix.platform }} | |
| strategy: | |
| matrix: | |
| platform: [ubuntu-latest, windows-latest, macos-latest] | |
| python-version: ['3.9', '3.10'] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| # these libraries enable testing on Qt on linux | |
| - uses: tlambert03/setup-qt-libs@v1 | |
| # strategy borrowed from vispy for installing opengl libs on windows | |
| - name: Install Windows OpenGL | |
| if: runner.os == 'Windows' | |
| run: | | |
| git clone --depth 1 https://github.com/pyvista/gl-ci-helpers.git | |
| powershell gl-ci-helpers/appveyor/install_opengl.ps1 | |
| # note: if you need dependencies from conda, considering using | |
| # setup-miniconda: https://github.com/conda-incubator/setup-miniconda | |
| # and | |
| # tox-conda: https://github.com/tox-dev/tox-conda | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install setuptools tox tox-gh-actions | |
| # https://github.com/napari/cookiecutter-napari-plugin/commit/cb9a8c152b68473e8beabf44e7ab11fc46483b5d | |
| - name: Test | |
| uses: aganders3/headless-gui@v1 | |
| with: | |
| run: python -m tox | |
| - name: Coverage | |
| uses: codecov/codecov-action@v3 | |
| deploy: | |
| # this will run when you have tagged a commit with a version number | |
| # and requires that you have put your twine API key in your | |
| # github secrets (see readme for details) | |
| needs: [test] | |
| runs-on: ubuntu-latest | |
| if: contains(github.ref, 'tags') | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.x" | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -U setuptools setuptools_scm wheel twine build | |
| # skip build and publish for now | |
| # - name: Build and publish | |
| # env: | |
| # TWINE_USERNAME: __token__ | |
| # TWINE_PASSWORD: ${{ secrets.TWINE_API_KEY }} | |
| # run: | | |
| # git tag | |
| # python -m build . | |
| # twine upload --repository testpypi dist/* # Commented until API key is on github |