code polished

mcavallaro · Aug 19, 2020 · 7ec19ae · 7ec19ae
1 parent 8f7740e
commit 7ec19ae
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Showing 3 changed files with 5 additions and 6 deletions.
diff --git a/Makefile b/Makefile
@@ -21,7 +21,7 @@ clean:
 .PHONY: install
 install:
 	mkdir -p ./results/trace
-	cp *cpp ./results
+	cp *.cpp ./results
 	cp LICENSE ./results
-	cp *h ./results
+	cp *.h ./results
 
diff --git a/main.cpp b/main.cpp
@@ -35,7 +35,7 @@ if (argc != 9){
 
 ofstream swi;
 ofstream tran;
-ofstream mRNA;  
+ofstream mRNA;
 ofstream ss;
 ofstream PolIIss;
 ofstream PolII;
@@ -176,8 +176,8 @@ printf("%s %f %f %s %f %f %f \n",
     /* br.alpha / (br.delta + br.beta),*/
     media_Pol2,
     "mRNA",
-    br.beta * br.l_on / (br.l_on + br.l_off) / br.decay * 
-    (br.alpha + br.loop * mpol2 * br.beta) / (br.delta + br.beta) ,    
+    br.beta * br.l_on / (br.l_on + br.l_off) / br.decay *
+    (br.alpha + br.loop * mpol2 * br.beta) / (br.delta + br.beta),
     br.beta * mpol2 / br.decay * br.l_on / (br.l_on + br.l_off),
     media_mRNA);
 

diff --git a/results/trace/boostrap.py b/results/trace/boostrap.py
@@ -34,5 +34,4 @@ def CV(mean, x):
 # A05 mean 71.14697600000001 0.7060320154383931
 # A02 CV2 0.7957485888690067 0.012416012993820197
 
-#We discussed an older version of the manuscript with Cell Systems editor, who didn't find focus on transgenes relevant to cell-system biology. Genome-wide analysis is now included to support our study.