mLab Dashboard and API's

Features

mLab has the following modules:
Patient results: this module allows for client appointment management and client enrollment.
Sub-functions in this module include:
-Sample remote login: for allowing login of samples into the system for the samples being sent to the labs
-HTS results transmission: for HIV results for non – conclusive tests
-Client messaging: for consent and message of clients on results availability to enhance linkage to care

Installation

Please check the official laravel installation guide for server requirements before you start. Official Documentation

Alternative installation is possible without local dependencies relying on Docker.

Clone the repository

git clone https://github.com/palladiumkenya/mLab.git

Switch to the repo folder

cd mLab

Install all the dependencies using composer

composer install

Copy the example env file and make the required configuration changes in the .env file

cp .env.example .env

Generate a new application key

php artisan key:generate

Run the database migrations (Set the database connection in .env before migrating)

php artisan migrate

Start the local development server

php artisan serve

You can now access the server at http://localhost:8000

TL;DR command list

git clone https://github.com/palladiumkenya/mLab.git
cd mLab
composer install
cp .env.example .env
php artisan key:generate

Make sure you set the correct database connection information before running the migrations Environment variables

php artisan migrate
php artisan serve

Docker set up

git clone https://github.com/palladiumkenya/mLab.git
cd mLab
cp .env.example .env
mkdir src
copy all files into src folder (excluding docker-compose.yml,nginx.dockerfile,php.dockerfile and nginx folder)
docker-compose --env-file ./src/.env up -d --build site
You can now access the server at http://localhost:8085

Dependencies

• laravel-passport - For handling authentication
• laravel-cors - For handling Cross-Origin Resource Sharing (CORS)
• africastalking - For SMS

Folders

• app - Contains all the Eloquent models
• app/Http/Controllers - Contains all the api controllers
• app/Http/Middleware - Contains the JWT auth middleware
• app/Http/Controllers/VLResultsController.php - Contains the functions implementing the vl and eid results module
• app/Http/Controllers/HTSResultsController.php - Contains the functions implementing the hts results module
• app/Http/Controllers/RemoteLoginController.php - Contains the functions implementing the sample remote login module
• app/Http/Controllers/SendResultsController.php - Contains the functions implementing the sending of results via the mobile application
• app/Http/Controllers/TBResultsController.php - Contains the functions implementing the TB results module
• app/Http/Controllers/DataController.php - Contains the functions and queries for the highcharts
• config - Contains all the application configuration files
• database/factories - Contains the model factory for all the models
• database/migrations - Contains all the database migrations
• routes/api - Contains all the api routes
• routes/web - Contains all the dashboard routes
• tests - Contains all the application tests

Environment variables

• .env - Environment variables can be set in this file

Note : You can quickly set the database information and other variables in this file and have the application fully working.

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Testing API

Run the laravel development server

php artisan serve

The api can now be accessed at

http://localhost:8000/api

Request headers

Required	Key	Value
Yes	Content-Type	application/json
Yes	X-Requested-With	XMLHttpRequest
Optional	Authorization	Token {JWT}

Refer the api specification for more info.

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Authentication

This applications uses Passport to handle authentication. The token is passed with each request using the Authorization header with Token scheme. The Passport authentication middleware handles the validation and authentication of the token. Please check the following sources to learn more about JWT.

• https://github.com/laravel/passport/

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Cross-Origin Resource Sharing (CORS)

This applications has CORS enabled by default on all API endpoints. The default configuration allows requests from http://localhost:3000 and http://localhost:4200 to help speed up your frontend testing. The CORS allowed origins can be changed by setting them in the config file. Please check the following sources to learn more about CORS.

• https://developer.mozilla.org/en-US/docs/Web/HTTP/Access_control_CORS
• https://en.wikipedia.org/wiki/Cross-origin_resource_sharing
• https://www.w3.org/TR/cors

Dependencies

• laravel-cors - For handling Cross-Origin Resource Sharing (CORS)

License