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LatchBio

infrastructure for bioinformatics

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The LatchBio SDK

Why the LatchBio SDK

The previous generation of bioinformatics frameworks, eg. nextflow, Snakemake, WDL, etc., are difficult to develop with, use outdated languages, and lack features needed in a modern software framework.

The LatchBio SDK is a workflow description language built with an emphasis on developer ergonomics and the following mission-critical features:

Latch Verified

Latch Verified is a set of curated bioinformatics workflows built using the SDK. Check out source code and documentation at the linked repository.

Further Reading

Slack

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  1. latch latch Public

    a python bioinformatics framework

    Python 159 16

  2. lgenome lgenome Public

    Manage curated genomic resources for bioinformatics workflows.

    Python 2

Repositories

Showing 10 of 58 repositories
  • latch Public

    a python bioinformatics framework

    latchbio/latch’s past year of commit activity
    Python 159 MIT 16 23 4 Updated Jul 5, 2024
  • latch-base Public

    base container images for latch tasks

    latchbio/latch-base’s past year of commit activity
    Dockerfile 1 0 0 0 Updated Jul 5, 2024
  • latchbio/nextflow’s past year of commit activity
    Groovy 0 Apache-2.0 608 0 4 Updated Jul 5, 2024
  • sysbox-eks-ami Public

    Sysbox on Ubuntu AWS EC2 AMI for EKS nodes

    latchbio/sysbox-eks-ami’s past year of commit activity
    HCL 3 CC0-1.0 2 1 5 Updated Jul 4, 2024
  • latchbio/rnaseq-testdata’s past year of commit activity
    0 0 0 0 Updated Jul 3, 2024
  • latchbio/wf-fluentbio-pipseeker’s past year of commit activity
    Python 0 0 0 3 Updated Jul 1, 2024
  • latchbio/latch-data-validation’s past year of commit activity
    Python 0 CC0-1.0 0 0 1 Updated Jun 26, 2024
  • igv.js Public Forked from igvteam/igv.js

    Embeddable genomic visualization component based on the Integrative Genomics Viewer

    latchbio/igv.js’s past year of commit activity
    JavaScript 0 MIT 223 0 0 Updated Jun 17, 2024
  • loro Public Forked from loro-dev/loro

    Reimagine state management with CRDTs. Make your app collaborative effortlessly.

    latchbio/loro’s past year of commit activity
    Rust 0 MIT 59 0 0 Updated May 29, 2024
  • latchbio/latch-boilerplate’s past year of commit activity
    Perl 0 MIT 0 0 0 Updated May 21, 2024

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